| Chain sequence(s) |
A: LPAPKNLVVSRVTEDSARLSWTAPDAAFDSFYILYWEFATAGEAIVLTVPGSERSYDLTGLKPGTEYMVLIRGVKGGTRSSPLSAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:45)
[INFO] Main: Simulation completed successfully. (00:00:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 0.4301 | |
| 2 | P | A | -0.2245 | |
| 3 | A | A | -0.7157 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -1.9569 | |
| 6 | N | A | -1.4814 | |
| 7 | L | A | -0.1555 | |
| 8 | V | A | 1.1366 | |
| 9 | V | A | 0.5896 | |
| 10 | S | A | -0.5951 | |
| 11 | R | A | -1.8161 | |
| 12 | V | A | -1.0505 | |
| 13 | T | A | -1.8644 | |
| 14 | E | A | -2.9701 | |
| 15 | D | A | -3.0285 | |
| 16 | S | A | -2.2128 | |
| 17 | A | A | 0.0000 | |
| 18 | R | A | -1.2008 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.3775 | |
| 21 | W | A | 0.0000 | |
| 22 | T | A | -1.2730 | |
| 23 | A | A | -1.3968 | |
| 24 | P | A | -1.3820 | |
| 25 | D | A | -2.2687 | |
| 26 | A | A | -1.4372 | |
| 27 | A | A | -1.0566 | |
| 28 | F | A | 0.0000 | |
| 29 | D | A | -2.5961 | |
| 30 | S | A | -1.6450 | |
| 31 | F | A | 0.0000 | |
| 32 | Y | A | 0.4313 | |
| 33 | I | A | 0.0000 | |
| 34 | L | A | 1.3294 | |
| 35 | Y | A | 1.2368 | |
| 36 | W | A | 0.5036 | |
| 37 | E | A | -0.3051 | |
| 38 | F | A | 1.4675 | |
| 39 | A | A | 0.4707 | |
| 40 | T | A | -0.1429 | |
| 41 | A | A | -0.0952 | |
| 42 | G | A | -0.7500 | |
| 43 | E | A | -1.4448 | |
| 44 | A | A | 0.3616 | |
| 45 | I | A | 1.5642 | |
| 46 | V | A | 2.4091 | |
| 47 | L | A | 1.5430 | |
| 48 | T | A | 0.4957 | |
| 49 | V | A | 0.0000 | |
| 50 | P | A | -1.0779 | |
| 51 | G | A | 0.0000 | |
| 52 | S | A | -1.6000 | |
| 53 | E | A | -1.6504 | |
| 54 | R | A | -1.1356 | |
| 55 | S | A | -0.6269 | |
| 56 | Y | A | -0.7090 | |
| 57 | D | A | -1.6617 | |
| 58 | L | A | 0.0000 | |
| 59 | T | A | -1.5231 | |
| 60 | G | A | -1.5911 | |
| 61 | L | A | 0.0000 | |
| 62 | K | A | -3.0763 | |
| 63 | P | A | -2.5451 | |
| 64 | G | A | -1.7973 | |
| 65 | T | A | -1.5620 | |
| 66 | E | A | -0.5782 | |
| 67 | Y | A | 0.0000 | |
| 68 | M | A | 1.1514 | |
| 69 | V | A | 0.0000 | |
| 70 | L | A | 0.7443 | |
| 71 | I | A | 0.0000 | |
| 72 | R | A | -0.7536 | |
| 73 | G | A | 0.0000 | |
| 74 | V | A | -1.7008 | |
| 75 | K | A | -2.0948 | |
| 76 | G | A | -1.7413 | |
| 77 | G | A | -1.6355 | |
| 78 | T | A | -1.5973 | |
| 79 | R | A | -2.0969 | |
| 80 | S | A | 0.0000 | |
| 81 | S | A | -0.5234 | |
| 82 | P | A | -0.6601 | |
| 83 | L | A | -0.4474 | |
| 84 | S | A | 0.2787 | |
| 85 | A | A | 1.0912 | |
| 86 | I | A | 1.8287 | |
| 87 | F | A | 0.0000 | |
| 88 | T | A | -0.6015 | |
| 89 | T | A | -1.8815 |