| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFKDIVVDGKVLVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPLHEGADDRVDFSFDPKQTQLFIVGCEPPTGEHWDLAAPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYVRSGPVGHPLPDAPPPSPLYVPPPPSSPEAVLPSYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPENNVYNPECFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9485 | |
| 2 | L | A | 1.9766 | |
| 3 | P | A | 0.7123 | |
| 4 | P | A | 0.1225 | |
| 5 | T | A | 0.2094 | |
| 6 | T | A | 0.1557 | |
| 7 | P | A | 0.2639 | |
| 8 | V | A | 1.2528 | |
| 9 | A | A | 0.0510 | |
| 10 | K | A | -1.1359 | |
| 11 | V | A | -0.3725 | |
| 12 | Q | A | -1.5075 | |
| 13 | S | A | -1.6531 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.6279 | |
| 16 | E | A | -2.5496 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4310 | |
| 20 | P | A | 0.0359 | |
| 21 | T | A | 0.1052 | |
| 22 | S | A | -0.1803 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0810 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2466 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7582 | |
| 31 | R | A | -2.6979 | |
| 32 | L | A | -0.8374 | |
| 33 | L | A | 1.0861 | |
| 34 | T | A | 1.3579 | |
| 35 | V | A | 1.8838 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2403 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6327 | |
| 40 | K | A | -1.8484 | |
| 41 | D | A | -0.6924 | |
| 42 | I | A | 1.3482 | |
| 43 | V | A | 2.1994 | |
| 44 | V | A | 1.4255 | |
| 45 | D | A | -1.0527 | |
| 46 | G | A | -0.6006 | |
| 47 | K | A | -0.2535 | |
| 48 | V | A | 2.1824 | |
| 49 | L | A | 2.5175 | |
| 50 | V | A | 1.5036 | |
| 51 | P | A | 0.3784 | |
| 52 | K | A | -0.6580 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1135 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4334 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.3375 | |
| 70 | K | A | -1.8721 | |
| 71 | F | A | -0.9264 | |
| 72 | A | A | -0.6071 | |
| 73 | L | A | -0.9422 | |
| 74 | P | A | -1.2516 | |
| 75 | Q | A | -2.4746 | |
| 76 | K | A | -3.0936 | |
| 77 | D | A | -2.9819 | |
| 78 | F | A | -1.6431 | |
| 79 | Y | A | -1.9221 | |
| 80 | D | A | -2.7221 | |
| 81 | P | A | -2.3963 | |
| 82 | E | A | -3.0329 | |
| 83 | K | A | -3.3875 | |
| 84 | E | A | -2.4530 | |
| 85 | R | A | -1.2845 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.5148 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -1.0415 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.4145 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7759 | |
| 99 | G | A | -0.6016 | |
| 100 | P | A | -0.4285 | |
| 101 | L | A | -0.0183 | |
| 102 | G | A | -0.4692 | |
| 103 | K | A | -0.7655 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.3971 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.1618 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.4150 | |
| 110 | L | A | -0.2258 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.2641 | |
| 113 | K | A | -0.5355 | |
| 114 | L | A | -1.0839 | |
| 115 | G | A | -0.8553 | |
| 116 | D | A | -1.2660 | |
| 117 | T | A | -1.1217 | |
| 118 | E | A | -2.4823 | |
| 119 | N | A | -2.4039 | |
| 120 | P | A | -1.4935 | |
| 121 | T | A | -0.8623 | |
| 122 | A | A | -0.5222 | |
| 123 | P | A | -0.7006 | |
| 124 | L | A | -0.6594 | |
| 125 | H | A | -1.7724 | |
| 126 | E | A | -2.8470 | |
| 127 | G | A | -2.1920 | |
| 128 | A | A | -1.6307 | |
| 129 | D | A | -2.3727 | |
| 130 | D | A | -2.0198 | |
| 131 | R | A | -1.4661 | |
| 132 | V | A | -0.5125 | |
| 133 | D | A | -1.3456 | |
| 134 | F | A | -0.5913 | |
| 135 | S | A | -0.4795 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | 0.0000 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.1946 | |
| 140 | Q | A | -0.1373 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5001 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2179 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0572 | |
| 157 | D | A | 0.4241 | |
| 158 | L | A | 0.9733 | |
| 159 | A | A | 0.8455 | |
| 160 | A | A | 0.2902 | |
| 161 | P | A | 0.5075 | |
| 162 | C | A | 0.5621 | |
| 163 | P | A | 0.0201 | |
| 164 | G | A | -0.1396 | |
| 165 | L | A | 0.4886 | |
| 166 | P | A | -0.1726 | |
| 167 | P | A | -0.3694 | |
| 168 | G | A | -0.4401 | |
| 169 | A | A | -0.0822 | |
| 170 | C | A | 0.6032 | |
| 171 | P | A | 0.7368 | |
| 172 | P | A | 0.9161 | |
| 173 | I | A | 1.9030 | |
| 174 | Q | A | 0.8866 | |
| 175 | L | A | 1.3166 | |
| 176 | V | A | 0.7693 | |
| 177 | N | A | -0.3541 | |
| 178 | S | A | -0.0240 | |
| 179 | V | A | 0.3588 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3836 | |
| 182 | D | A | 0.1256 | |
| 183 | G | A | -0.1748 | |
| 184 | D | A | -0.5352 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | -0.4154 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1237 | |
| 190 | F | A | 0.0838 | |
| 191 | G | A | -0.0654 | |
| 192 | N | A | -0.2403 | |
| 193 | M | A | -0.0891 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.1929 | |
| 197 | E | A | -2.3322 | |
| 198 | L | A | -1.1312 | |
| 199 | Q | A | -2.3885 | |
| 200 | Q | A | -3.1940 | |
| 201 | D | A | -3.4284 | |
| 202 | R | A | -3.2389 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1836 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3459 | |
| 211 | S | A | -1.8220 | |
| 212 | T | A | -1.3512 | |
| 213 | R | A | -1.8773 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1981 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3273 | |
| 220 | L | A | 0.5427 | |
| 221 | K | A | -1.2392 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9169 | |
| 224 | N | A | -1.6502 | |
| 225 | E | A | -1.3826 | |
| 226 | A | A | -0.6572 | |
| 227 | Y | A | -0.4307 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6821 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.0944 | |
| 234 | F | A | 0.1446 | |
| 235 | G | A | -0.7083 | |
| 236 | R | A | -2.1884 | |
| 237 | R | A | -2.5475 | |
| 238 | E | A | -1.5846 | |
| 239 | Q | A | 0.0952 | |
| 240 | V | A | 1.4771 | |
| 241 | Y | A | 0.9341 | |
| 242 | A | A | 0.0023 | |
| 243 | R | A | -1.3104 | |
| 244 | H | A | -1.1583 | |
| 245 | F | A | -0.1805 | |
| 246 | Y | A | 0.0000 | |
| 247 | V | A | 0.0000 | |
| 248 | R | A | -0.4487 | |
| 249 | S | A | -1.3303 | |
| 250 | G | A | -0.9236 | |
| 251 | P | A | -0.7034 | |
| 252 | V | A | -0.6241 | |
| 253 | G | A | -0.9336 | |
| 254 | H | A | -1.0837 | |
| 255 | P | A | -0.7237 | |
| 256 | L | A | 0.0218 | |
| 257 | P | A | -0.8548 | |
| 258 | D | A | -1.5372 | |
| 259 | A | A | 0.0000 | |
| 260 | P | A | -0.5691 | |
| 261 | P | A | -0.4285 | |
| 262 | P | A | -0.0165 | |
| 263 | S | A | 0.2251 | |
| 264 | P | A | 0.6828 | |
| 265 | L | A | 1.6758 | |
| 266 | Y | A | 1.4998 | |
| 267 | V | A | 1.7279 | |
| 268 | P | A | 0.4880 | |
| 269 | P | A | -0.0894 | |
| 270 | P | A | -0.6324 | |
| 271 | P | A | -0.6103 | |
| 272 | S | A | -0.7728 | |
| 273 | S | A | -0.7915 | |
| 274 | P | A | -0.7400 | |
| 275 | E | A | -1.3224 | |
| 276 | A | A | -0.1659 | |
| 277 | V | A | 1.3062 | |
| 278 | L | A | 1.0209 | |
| 279 | P | A | 0.2924 | |
| 280 | S | A | 0.0000 | |
| 281 | Y | A | 0.4633 | |
| 282 | D | A | -0.1095 | |
| 283 | Y | A | 1.1926 | |
| 284 | F | A | 0.8051 | |
| 285 | G | A | 0.2335 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.6301 | |
| 291 | L | A | 1.5840 | |
| 292 | V | A | 0.5091 | |
| 293 | S | A | -0.2281 | |
| 294 | S | A | -0.8461 | |
| 295 | D | A | -1.8841 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.0755 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.7219 | |
| 301 | R | A | -2.0191 | |
| 302 | P | A | -1.0320 | |
| 303 | F | A | -0.1674 | |
| 304 | W | A | -0.3506 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.1680 | |
| 307 | R | A | -2.9069 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.8290 | |
| 310 | G | A | -1.3616 | |
| 311 | N | A | -1.3750 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.6752 | |
| 319 | N | A | -0.7602 | |
| 320 | E | A | 0.0000 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.4101 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.2384 | |
| 333 | N | A | 0.3721 | |
| 334 | F | A | 1.4410 | |
| 335 | T | A | 0.8072 | |
| 336 | I | A | 0.4871 | |
| 337 | S | A | -0.9072 | |
| 338 | Q | A | -1.6835 | |
| 339 | Q | A | -1.4873 | |
| 340 | L | A | 0.3793 | |
| 341 | C | A | 0.1321 | |
| 342 | T | A | -0.4647 | |
| 343 | P | A | -1.0660 | |
| 344 | E | A | -2.2433 | |
| 345 | N | A | -2.0557 | |
| 346 | N | A | -1.3695 | |
| 347 | V | A | 0.7174 | |
| 348 | Y | A | 0.9066 | |
| 349 | N | A | -0.5044 | |
| 350 | P | A | -1.2703 | |
| 351 | E | A | -1.8659 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -1.2005 | |
| 354 | K | A | -2.0846 | |
| 355 | N | A | -1.6384 | |
| 356 | Y | A | 0.1259 | |
| 357 | L | A | 0.7936 | |
| 358 | R | A | 0.9748 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.1567 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.2397 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0456 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6832 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2739 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.2928 | |
| 376 | L | A | -1.6865 | |
| 377 | D | A | -1.9665 | |
| 378 | P | A | -1.0320 | |
| 379 | G | A | -1.0107 | |
| 380 | V | A | -0.9262 | |
| 381 | L | A | -0.5242 | |
| 382 | A | A | -0.6473 | |
| 383 | H | A | -0.8262 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.3835 | |
| 386 | T | A | -0.5687 | |
| 387 | M | A | -0.3330 | |
| 388 | N | A | -0.8669 | |
| 389 | P | A | -1.2200 | |
| 390 | T | A | -1.4376 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4014 | |
| 393 | E | A | -2.7598 | |
| 394 | N | A | -2.1900 | |
| 395 | W | A | -1.3904 | |
| 396 | N | A | -1.2304 | |
| 397 | L | A | -0.1297 | |
| 398 | G | A | 0.6031 | |
| 399 | F | A | 2.3810 | |
| 400 | V | A | 1.7552 | |
| 401 | P | A | 0.0510 | |
| 402 | P | A | -1.8424 | |
| 403 | K | A | -3.3349 | |
| 404 | E | A | -3.7808 | |
| 405 | R | A | -3.9294 | |
| 406 | E | A | -3.7604 | |
| 407 | D | A | -2.8160 | |
| 408 | P | A | -1.7366 | |
| 409 | Y | A | -0.9883 | |
| 410 | K | A | -2.0918 | |
| 411 | G | A | -0.6227 | |
| 412 | L | A | 0.6736 | |
| 413 | I | A | 1.6540 | |
| 414 | F | A | 0.7166 | |
| 415 | W | A | -0.2682 | |
| 416 | E | A | -1.6063 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9194 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0804 | |
| 421 | E | A | -2.7039 | |
| 422 | R | A | -2.2722 | |
| 423 | F | A | -1.2400 | |
| 424 | S | A | -1.4909 | |
| 425 | Q | A | -1.8089 | |
| 426 | D | A | -3.0137 | |
| 427 | L | A | 0.0000 | |
| 428 | D | A | -2.9043 | |
| 429 | Q | A | -2.6697 | |
| 430 | F | A | -1.5555 | |
| 431 | A | A | -0.9303 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.7349 | |
| 435 | K | A | -0.8889 | |
| 436 | F | A | 0.0841 | |
| 437 | L | A | 0.9231 | |
| 438 | Y | A | 0.7768 | |
| 439 | Q | A | -0.3323 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine