Project name: query_structure

Status: done

Started: 2026-03-16 23:47:09
Settings
Chain sequence(s) A: GVIPCGESCVFIPCISSVVGCTCKNKVCYRN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:23)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:24)
Show buried residues

Minimal score value
-1.8858
Maximal score value
2.8943
Average score
0.585
Total score value
18.1351

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A 0.0896
2 V A 1.9131
3 I A 1.9802
4 P A 0.6283
5 C A 0.4581
6 G A -0.1793
7 E A 0.0577
8 S A 0.4617
9 C A 1.1902
10 V A 2.3297
11 F A 2.8943
12 I A 2.1639
13 P A 1.3673
14 C A 0.0000
15 I A 2.4951
16 S A 1.6892
17 S A 1.5442
18 V A 2.7173
19 V A 2.1488
20 G A 0.4242
21 C A 0.0000
22 T A -0.3402
23 C A -0.3502
24 K A -1.6451
25 N A -1.8858
26 K A -1.2095
27 V A -0.7298
28 C A 0.0000
29 Y A -0.2886
30 R A -0.6703
31 N A -1.1190
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Laboratory of Theory of Biopolymers 2018