Project name: query_structure

Status: done

Started: 2026-03-16 23:11:57
Settings
Chain sequence(s) A: CGETCTLGTCYTAGCSCSWPVCTRNGVPI
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:05)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:06)
Show buried residues

Minimal score value
-1.3492
Maximal score value
1.7614
Average score
0.48
Total score value
13.9193

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A 0.8668
2 G A 0.0890
3 E A 0.1277
4 T A 0.5090
5 C A 0.0000
6 T A 0.9528
7 L A 1.5183
8 G A 0.7775
9 T A 0.7765
10 C A 0.9496
11 Y A 1.2302
12 T A 0.3427
13 A A 0.0942
14 G A -0.6084
15 C A -0.0461
16 S A -0.0695
17 C A 0.7610
18 S A 0.6643
19 W A 1.5406
20 P A 1.1878
21 V A 1.3768
22 C A 0.0000
23 T A 0.2014
24 R A -0.7938
25 N A -1.3492
26 G A -0.6224
27 V A 0.8219
28 P A 0.8592
29 I A 1.7614
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Laboratory of Theory of Biopolymers 2018