| Chain sequence(s) |
A: DVQLVESGGGLVQPGGSLKLSCAASGFILDYYAIGWFRQAPGKEREGVLCIDASDDIAYYADSVKGRFTISRDNSKNTVYLQMNSLRPEDTAVYYCATPIGLSSSCLLEYDYDYWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:11)
[INFO] Main: Simulation completed successfully. (00:01:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -1.7282 | |
| 2 | V | A | -0.2179 | |
| 3 | Q | A | -0.8771 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 1.6395 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.2365 | |
| 8 | G | A | -0.4232 | |
| 9 | G | A | -0.2913 | |
| 10 | G | A | 0.0561 | |
| 11 | L | A | 1.5096 | |
| 12 | V | A | 0.0000 | |
| 13 | Q | A | -1.2198 | |
| 14 | P | A | -0.4182 | |
| 15 | G | A | -0.5174 | |
| 16 | G | A | -0.1703 | |
| 17 | S | A | -0.1951 | |
| 18 | L | A | -0.0977 | |
| 19 | K | A | -1.6857 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.0261 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | 0.0305 | |
| 24 | A | A | -0.0276 | |
| 25 | S | A | -0.2959 | |
| 26 | G | A | -0.4214 | |
| 27 | F | A | 0.4586 | |
| 28 | I | A | 1.7805 | |
| 29 | L | A | 0.0000 | |
| 30 | D | A | -0.5080 | |
| 31 | Y | A | 1.2484 | |
| 32 | Y | A | 0.6152 | |
| 33 | A | A | 0.0000 | |
| 34 | I | A | 0.0000 | |
| 35 | G | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | F | A | 0.0000 | |
| 38 | R | A | 0.0000 | |
| 39 | Q | A | -0.5756 | |
| 40 | A | A | -0.1244 | |
| 41 | P | A | -0.3370 | |
| 42 | G | A | -0.8144 | |
| 43 | K | A | -2.1208 | |
| 44 | E | A | -2.2515 | |
| 45 | R | A | -1.2472 | |
| 46 | E | A | -1.2945 | |
| 47 | G | A | -0.2253 | |
| 48 | V | A | 0.0000 | |
| 49 | L | A | 0.0000 | |
| 50 | C | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | D | A | -0.4737 | |
| 53 | A | A | -0.0671 | |
| 54 | S | A | -0.5341 | |
| 55 | D | A | -2.1462 | |
| 56 | D | A | -1.9184 | |
| 57 | I | A | 0.7376 | |
| 58 | A | A | 0.3326 | |
| 59 | Y | A | 0.7243 | |
| 60 | Y | A | 0.5015 | |
| 61 | A | A | -0.2414 | |
| 62 | D | A | -1.8258 | |
| 63 | S | A | -0.5336 | |
| 64 | V | A | 0.0000 | |
| 65 | K | A | -1.7843 | |
| 66 | G | A | -0.8336 | |
| 67 | R | A | -0.4200 | |
| 68 | F | A | 0.0000 | |
| 69 | T | A | -0.0467 | |
| 70 | I | A | 0.0000 | |
| 71 | S | A | -0.1897 | |
| 72 | R | A | -0.3419 | |
| 73 | D | A | -0.7403 | |
| 74 | N | A | -1.4170 | |
| 75 | S | A | -0.7461 | |
| 76 | K | A | -1.7702 | |
| 77 | N | A | -0.6345 | |
| 78 | T | A | 0.0000 | |
| 79 | V | A | 0.0000 | |
| 80 | Y | A | 0.2027 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -0.4457 | |
| 83 | M | A | 0.0000 | |
| 84 | N | A | -0.6682 | |
| 85 | S | A | -0.3075 | |
| 86 | L | A | 0.0000 | |
| 87 | R | A | -1.0445 | |
| 88 | P | A | -0.7404 | |
| 89 | E | A | -1.8619 | |
| 90 | D | A | 0.0000 | |
| 91 | T | A | -0.0165 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | 0.6553 | |
| 94 | Y | A | 0.0000 | |
| 95 | Y | A | 0.1730 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | T | A | 0.0000 | |
| 99 | P | A | 0.0000 | |
| 100 | I | A | 1.9440 | |
| 101 | G | A | 0.2677 | |
| 102 | L | A | 1.4691 | |
| 103 | S | A | 0.1911 | |
| 104 | S | A | -0.2342 | |
| 105 | S | A | -0.0874 | |
| 106 | C | A | 0.1376 | |
| 107 | L | A | 0.4897 | |
| 108 | L | A | 0.5399 | |
| 109 | E | A | -0.8489 | |
| 110 | Y | A | 1.0470 | |
| 111 | D | A | -0.0513 | |
| 112 | Y | A | 0.0000 | |
| 113 | D | A | -1.7071 | |
| 114 | Y | A | 0.1834 | |
| 115 | W | A | 0.3630 | |
| 116 | G | A | -0.2165 | |
| 117 | Q | A | -1.2162 | |
| 118 | G | A | -0.2388 | |
| 119 | T | A | 0.2654 | |
| 120 | L | A | 1.6085 | |
| 121 | V | A | 0.0000 | |
| 122 | T | A | 0.1504 | |
| 123 | V | A | 0.0000 | |
| 124 | S | A | -0.1643 | |
| 125 | S | A | -0.2356 |