| Chain sequence(s) |
L: KKWYGPGGIGACLD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:09)
[INFO] Main: Simulation completed successfully. (00:00:10)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 212 | K | L | -2.0153 | |
| 213 | K | L | -1.7329 | |
| 214 | W | L | 0.5518 | |
| 215 | Y | L | 1.4073 | |
| 216 | G | L | -0.0133 | |
| 217 | P | L | -0.3733 | |
| 218 | G | L | -0.5967 | |
| 219 | G | L | -0.1896 | |
| 220 | I | L | 1.8866 | |
| 221 | G | L | 0.1115 | |
| 222 | A | L | 0.2553 | |
| 223 | C | L | 0.5678 | |
| 224 | L | L | 1.0948 | |
| 225 | D | L | -1.5127 |