Project name: 10_rank

Status: done

Started: 2026-04-28 14:23:51
Settings
Chain sequence(s) B: LMEEIKKLNKEQHELNKKYIQLFFESVEVRKGPDTEENKKKEGQLSWEMFQVQSKYRETHKKVKELQEEWRKLS
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:07:02)
[INFO]       Main:     Simulation completed successfully.                                          (00:07:03)
Show buried residues

Minimal score value
-5.238
Maximal score value
1.5502
Average score
-2.362
Total score value
-174.7853

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 L B -1.0036
2 M B -1.4895
3 E B -3.1165
4 E B -3.2417
5 I B 0.0000
6 K B -4.0698
7 K B -4.2206
8 L B -3.5912
9 N B -3.7564
10 K B -4.4763
11 E B -4.0417
12 Q B 0.0000
13 H B -3.8655
14 E B -4.3941
15 L B 0.0000
16 N B -3.4926
17 K B -3.5213
18 K B -3.0589
19 Y B -0.9510
20 I B -0.0242
21 Q B -0.9597
22 L B 0.0000
23 F B 0.9010
24 F B 1.3058
25 E B -0.7366
26 S B 0.0000
27 V B -1.1965
28 E B -2.4806
29 V B -3.0363
30 R B -3.7544
31 K B -3.3821
32 G B -2.4649
33 P B -2.4976
34 D B -3.4638
35 T B -3.3244
36 E B -4.3217
37 E B -4.5659
38 N B -4.8915
39 K B -5.2380
40 K B -4.8045
41 K B -4.2197
42 E B -3.5602
43 G B -2.6867
44 Q B -2.1469
45 L B -0.9129
46 S B -0.1217
47 W B 0.7046
48 E B 0.0299
49 M B 0.6116
50 F B 1.5502
51 Q B -0.0647
52 V B 0.0000
53 Q B -1.1677
54 S B -1.5764
55 K B -2.8685
56 Y B -3.0311
57 R B -3.9437
58 E B -4.3447
59 T B -3.7714
60 H B -3.8307
61 K B -4.8247
62 K B -4.3007
63 V B 0.0000
64 K B -4.5929
65 E B -4.4985
66 L B 0.0000
67 Q B -3.5791
68 E B -4.2636
69 E B -3.2259
70 W B -2.0349
71 R B -3.0981
72 K B -2.6398
73 L B -0.3626
74 S B -0.7872
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Laboratory of Theory of Biopolymers 2018