| Chain sequence(s) |
B: LMEEIKKLNKEQHELNKKYIQLFFESVEVRKGPDTEENKKKEGQLSWEMFQVQSKYRETHKKVKELQEEWRKLS
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:07:02)
[INFO] Main: Simulation completed successfully. (00:07:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | B | -1.0036 | |
| 2 | M | B | -1.4895 | |
| 3 | E | B | -3.1165 | |
| 4 | E | B | -3.2417 | |
| 5 | I | B | 0.0000 | |
| 6 | K | B | -4.0698 | |
| 7 | K | B | -4.2206 | |
| 8 | L | B | -3.5912 | |
| 9 | N | B | -3.7564 | |
| 10 | K | B | -4.4763 | |
| 11 | E | B | -4.0417 | |
| 12 | Q | B | 0.0000 | |
| 13 | H | B | -3.8655 | |
| 14 | E | B | -4.3941 | |
| 15 | L | B | 0.0000 | |
| 16 | N | B | -3.4926 | |
| 17 | K | B | -3.5213 | |
| 18 | K | B | -3.0589 | |
| 19 | Y | B | -0.9510 | |
| 20 | I | B | -0.0242 | |
| 21 | Q | B | -0.9597 | |
| 22 | L | B | 0.0000 | |
| 23 | F | B | 0.9010 | |
| 24 | F | B | 1.3058 | |
| 25 | E | B | -0.7366 | |
| 26 | S | B | 0.0000 | |
| 27 | V | B | -1.1965 | |
| 28 | E | B | -2.4806 | |
| 29 | V | B | -3.0363 | |
| 30 | R | B | -3.7544 | |
| 31 | K | B | -3.3821 | |
| 32 | G | B | -2.4649 | |
| 33 | P | B | -2.4976 | |
| 34 | D | B | -3.4638 | |
| 35 | T | B | -3.3244 | |
| 36 | E | B | -4.3217 | |
| 37 | E | B | -4.5659 | |
| 38 | N | B | -4.8915 | |
| 39 | K | B | -5.2380 | |
| 40 | K | B | -4.8045 | |
| 41 | K | B | -4.2197 | |
| 42 | E | B | -3.5602 | |
| 43 | G | B | -2.6867 | |
| 44 | Q | B | -2.1469 | |
| 45 | L | B | -0.9129 | |
| 46 | S | B | -0.1217 | |
| 47 | W | B | 0.7046 | |
| 48 | E | B | 0.0299 | |
| 49 | M | B | 0.6116 | |
| 50 | F | B | 1.5502 | |
| 51 | Q | B | -0.0647 | |
| 52 | V | B | 0.0000 | |
| 53 | Q | B | -1.1677 | |
| 54 | S | B | -1.5764 | |
| 55 | K | B | -2.8685 | |
| 56 | Y | B | -3.0311 | |
| 57 | R | B | -3.9437 | |
| 58 | E | B | -4.3447 | |
| 59 | T | B | -3.7714 | |
| 60 | H | B | -3.8307 | |
| 61 | K | B | -4.8247 | |
| 62 | K | B | -4.3007 | |
| 63 | V | B | 0.0000 | |
| 64 | K | B | -4.5929 | |
| 65 | E | B | -4.4985 | |
| 66 | L | B | 0.0000 | |
| 67 | Q | B | -3.5791 | |
| 68 | E | B | -4.2636 | |
| 69 | E | B | -3.2259 | |
| 70 | W | B | -2.0349 | |
| 71 | R | B | -3.0981 | |
| 72 | K | B | -2.6398 | |
| 73 | L | B | -0.3626 | |
| 74 | S | B | -0.7872 |