| Chain sequence(s) |
B: GSVEQVSVSVSTDELLALGPSLGVAFGFGENEEEAVAEAQKQPPHRLVVA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:17)
[INFO] Main: Simulation completed successfully. (00:00:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | B | -0.2884 | |
| 2 | S | B | -0.1741 | |
| 3 | V | B | 0.4187 | |
| 4 | E | B | -1.2689 | |
| 5 | Q | B | -0.9056 | |
| 6 | V | B | 1.1285 | |
| 7 | S | B | 1.2840 | |
| 8 | V | B | 2.1209 | |
| 9 | S | B | 0.8328 | |
| 10 | V | B | 0.3688 | |
| 11 | S | B | -0.6853 | |
| 12 | T | B | -0.4261 | |
| 13 | D | B | -1.8251 | |
| 14 | E | B | -1.6887 | |
| 15 | L | B | 0.0000 | |
| 16 | L | B | 1.1128 | |
| 17 | A | B | 0.3696 | |
| 18 | L | B | 1.2644 | |
| 19 | G | B | 1.0172 | |
| 20 | P | B | 0.5954 | |
| 21 | S | B | 0.1722 | |
| 22 | L | B | 0.2672 | |
| 23 | G | B | -0.8007 | |
| 24 | V | B | -0.3424 | |
| 25 | A | B | -0.9299 | |
| 26 | F | B | 0.7714 | |
| 27 | G | B | 0.0860 | |
| 28 | F | B | 0.6562 | |
| 29 | G | B | -1.8162 | |
| 30 | E | B | -2.9338 | |
| 31 | N | B | -2.9917 | |
| 32 | E | B | -3.2709 | |
| 33 | E | B | -3.2582 | |
| 34 | E | B | -3.0888 | |
| 35 | A | B | -1.5314 | |
| 36 | V | B | -0.4421 | |
| 37 | A | B | -1.5317 | |
| 38 | E | B | -1.9522 | |
| 39 | A | B | -1.1313 | |
| 40 | Q | B | -2.3107 | |
| 41 | K | B | -2.8814 | |
| 42 | Q | B | -2.3994 | |
| 43 | P | B | -1.8255 | |
| 44 | P | B | -1.7354 | |
| 45 | H | B | -1.7075 | |
| 46 | R | B | -1.7635 | |
| 47 | L | B | 0.4038 | |
| 48 | V | B | 1.7240 | |
| 49 | V | B | 1.2556 | |
| 50 | A | B | 0.9405 |