| Chain sequence(s) |
A: NWVNVISDLKKIEDLIQSMHIDATLYTESDVHPSCKVTAMKCFLLELQVISLESGDASIHDTVENLIILANNSLSSNGNVTESGCKECEELEEKNIKEFLQSFVHIVQMFINTS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | IT111A,IR68A,IK67A,VT3A,DK8A,ER93A |
| Energy difference between WT (input) and mutated protein (by FoldX) | -1.22368 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] FoldX: Building mutant model (00:02:09)
[INFO] FoldX: Starting FoldX energy minimalization (00:03:36)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:31)
[INFO] Main: Simulation completed successfully. (00:04:32)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | N | A | -1.2730 | |
| 2 | W | A | 0.0000 | |
| 3 | T | A | -0.1746 | mutated: VT3A |
| 4 | N | A | -0.6004 | |
| 5 | V | A | 0.0000 | |
| 6 | I | A | 0.2934 | |
| 7 | S | A | -0.1583 | |
| 8 | K | A | -0.4136 | mutated: DK8A |
| 9 | L | A | 0.0000 | |
| 10 | K | A | -2.0202 | |
| 11 | K | A | -1.4940 | |
| 12 | I | A | 0.0000 | |
| 13 | E | A | -1.5367 | |
| 14 | D | A | -1.9107 | |
| 15 | L | A | 0.0413 | |
| 16 | I | A | 0.0000 | |
| 17 | Q | A | -1.2367 | |
| 18 | S | A | -0.3835 | |
| 19 | M | A | 0.0301 | |
| 20 | H | A | -0.8965 | |
| 21 | I | A | -0.2455 | |
| 22 | D | A | -1.7412 | |
| 23 | A | A | -0.3262 | |
| 24 | T | A | -0.1333 | |
| 25 | L | A | 0.0000 | |
| 26 | Y | A | -0.0226 | |
| 27 | T | A | 0.0000 | |
| 28 | E | A | -0.2402 | |
| 29 | S | A | -0.5415 | |
| 30 | D | A | -1.7812 | |
| 31 | V | A | -0.2856 | |
| 32 | H | A | -0.9936 | |
| 33 | P | A | -0.4668 | |
| 34 | S | A | -0.2395 | |
| 35 | C | A | 0.0190 | |
| 36 | K | A | -0.2097 | |
| 37 | V | A | 0.1506 | |
| 38 | T | A | 0.0141 | |
| 39 | A | A | 0.0000 | |
| 40 | M | A | 0.0000 | |
| 41 | K | A | -0.8956 | |
| 42 | C | A | 0.0000 | |
| 43 | F | A | 0.0000 | |
| 44 | L | A | 0.0000 | |
| 45 | L | A | 1.3587 | |
| 46 | E | A | 0.0000 | |
| 47 | L | A | 0.0000 | |
| 48 | Q | A | -0.2680 | |
| 49 | V | A | 0.4669 | |
| 50 | I | A | 0.0000 | |
| 51 | S | A | 0.0000 | |
| 52 | L | A | 1.2184 | |
| 53 | E | A | -1.5455 | |
| 54 | S | A | -0.4441 | |
| 55 | G | A | -0.5624 | |
| 56 | D | A | -0.5796 | |
| 57 | A | A | -0.1373 | |
| 58 | S | A | -0.1220 | |
| 59 | I | A | 0.0000 | |
| 60 | H | A | -1.0706 | |
| 61 | D | A | -1.9251 | |
| 62 | T | A | 0.0000 | |
| 63 | V | A | 0.0000 | |
| 64 | E | A | -1.8672 | |
| 65 | N | A | -0.5908 | |
| 66 | L | A | 0.0000 | |
| 67 | K | A | -0.8089 | mutated: IK67A |
| 68 | R | A | -1.5341 | mutated: IR68A |
| 69 | L | A | -0.0962 | |
| 70 | A | A | 0.0000 | |
| 71 | N | A | -0.5851 | |
| 72 | N | A | -1.3427 | |
| 73 | S | A | -0.2589 | |
| 74 | L | A | 0.0000 | |
| 75 | S | A | -0.2509 | |
| 76 | S | A | -0.4782 | |
| 77 | N | A | -1.3886 | |
| 78 | G | A | -0.8938 | |
| 79 | N | A | -1.2056 | |
| 80 | V | A | 0.5578 | |
| 81 | T | A | 0.0140 | |
| 82 | E | A | -0.3893 | |
| 83 | S | A | -0.3581 | |
| 84 | G | A | -0.4785 | |
| 85 | C | A | -0.2493 | |
| 86 | K | A | -2.0100 | |
| 87 | E | A | -2.1189 | |
| 88 | C | A | -0.5693 | |
| 89 | E | A | -2.1270 | |
| 90 | E | A | -2.1128 | |
| 91 | L | A | -0.4977 | |
| 92 | E | A | -2.0190 | |
| 93 | R | A | -1.6320 | mutated: ER93A |
| 94 | K | A | -0.7616 | |
| 95 | N | A | -0.9070 | |
| 96 | I | A | -0.2592 | |
| 97 | K | A | -1.8040 | |
| 98 | E | A | -1.0860 | |
| 99 | F | A | 0.0000 | |
| 100 | L | A | 0.0000 | |
| 101 | Q | A | -0.7736 | |
| 102 | S | A | 0.0000 | |
| 103 | F | A | 0.0000 | |
| 104 | V | A | 0.2191 | |
| 105 | H | A | -0.9185 | |
| 106 | I | A | 0.0000 | |
| 107 | V | A | 0.0000 | |
| 108 | Q | A | -0.7117 | |
| 109 | M | A | 0.0474 | |
| 110 | F | A | 0.0000 | |
| 111 | T | A | -0.3248 | mutated: IT111A |
| 112 | N | A | -1.2889 | |
| 113 | T | A | -0.3357 | |
| 114 | S | A | -0.2255 |