| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFEDIVVNGKVLVPKVSGNQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTEPQHETADVRVDFSFDPKQTQLFIVGCEPPTGEHWDIAPPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRAGPDGHPLPSAPPPSPLYVPPPPSSPYAVLPSYDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTLPVNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9510 | |
| 2 | L | A | 1.9816 | |
| 3 | P | A | 0.6260 | |
| 4 | P | A | 0.2203 | |
| 5 | T | A | 0.0220 | |
| 6 | T | A | -0.0171 | |
| 7 | P | A | 0.2608 | |
| 8 | V | A | 1.2295 | |
| 9 | A | A | 0.0504 | |
| 10 | K | A | -1.0000 | |
| 11 | V | A | -0.1576 | |
| 12 | Q | A | -1.3916 | |
| 13 | S | A | -1.5513 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4260 | |
| 16 | E | A | -2.4411 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4592 | |
| 20 | P | A | 0.1278 | |
| 21 | T | A | 0.1598 | |
| 22 | S | A | -0.0973 | |
| 23 | L | A | 0.0898 | |
| 24 | F | A | -0.0321 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2906 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9003 | |
| 31 | R | A | -2.6849 | |
| 32 | L | A | -0.8025 | |
| 33 | L | A | 1.1504 | |
| 34 | T | A | 1.3540 | |
| 35 | V | A | 1.7896 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2919 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.7198 | |
| 40 | E | A | -1.8169 | |
| 41 | D | A | -0.7969 | |
| 42 | I | A | 1.2422 | |
| 43 | V | A | 2.1858 | |
| 44 | V | A | 1.6399 | |
| 45 | N | A | -0.5530 | |
| 46 | G | A | -0.3796 | |
| 47 | K | A | -0.1454 | |
| 48 | V | A | 1.9996 | |
| 49 | L | A | 2.5246 | |
| 50 | V | A | 1.4090 | |
| 51 | P | A | 0.2852 | |
| 52 | K | A | -0.7659 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | N | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1443 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3995 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2660 | |
| 70 | K | A | -1.7864 | |
| 71 | F | A | -0.6376 | |
| 72 | A | A | -0.5720 | |
| 73 | L | A | -0.8548 | |
| 74 | P | A | -1.2671 | |
| 75 | Q | A | -2.5020 | |
| 76 | K | A | -3.1054 | |
| 77 | D | A | -2.9873 | |
| 78 | F | A | -1.6599 | |
| 79 | Y | A | -1.8866 | |
| 80 | D | A | -2.6960 | |
| 81 | P | A | -2.3108 | |
| 82 | E | A | -3.0544 | |
| 83 | K | A | -3.3999 | |
| 84 | E | A | -2.4640 | |
| 85 | R | A | -1.2925 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6553 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9616 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3655 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6975 | |
| 99 | G | A | -0.5289 | |
| 100 | P | A | -0.3922 | |
| 101 | L | A | 0.0654 | |
| 102 | G | A | -0.2070 | |
| 103 | K | A | -0.6338 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4354 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | -0.2152 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -0.4500 | |
| 110 | L | A | -0.2082 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.2459 | |
| 113 | K | A | -0.6046 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.4007 | |
| 117 | T | A | -0.8579 | |
| 118 | E | A | -1.7624 | |
| 119 | N | A | -2.1531 | |
| 120 | P | A | -2.0069 | |
| 121 | T | A | -1.6899 | |
| 122 | E | A | -2.5457 | |
| 123 | P | A | -1.6836 | |
| 124 | Q | A | -2.1621 | |
| 125 | H | A | -2.1880 | |
| 126 | E | A | -2.6257 | |
| 127 | T | A | -1.7513 | |
| 128 | A | A | -1.2349 | |
| 129 | D | A | -2.0543 | |
| 130 | V | A | -1.3709 | |
| 131 | R | A | -1.1379 | |
| 132 | V | A | -0.5486 | |
| 133 | D | A | -1.4254 | |
| 134 | F | A | -0.6416 | |
| 135 | S | A | -0.4833 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.6651 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2404 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5690 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2070 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1706 | |
| 157 | D | A | 0.5210 | |
| 158 | I | A | 1.2375 | |
| 159 | A | A | 0.9168 | |
| 160 | P | A | 0.0687 | |
| 161 | P | A | 0.4363 | |
| 162 | C | A | 0.5075 | |
| 163 | P | A | 0.0087 | |
| 164 | G | A | -0.0791 | |
| 165 | L | A | 0.5949 | |
| 166 | P | A | -0.0981 | |
| 167 | P | A | -0.3311 | |
| 168 | G | A | -0.4193 | |
| 169 | A | A | -0.0217 | |
| 170 | C | A | 0.7347 | |
| 171 | P | A | 0.7868 | |
| 172 | P | A | 1.2006 | |
| 173 | I | A | 2.3640 | |
| 174 | Q | A | 1.2560 | |
| 175 | L | A | 1.5324 | |
| 176 | V | A | 0.8720 | |
| 177 | N | A | -0.2920 | |
| 178 | S | A | 0.0150 | |
| 179 | V | A | 0.4214 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3816 | |
| 182 | D | A | 0.0823 | |
| 183 | G | A | -0.1635 | |
| 184 | D | A | -0.5314 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1004 | |
| 190 | F | A | 0.0626 | |
| 191 | G | A | -0.1047 | |
| 192 | N | A | -0.2584 | |
| 193 | M | A | -0.1010 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3819 | |
| 197 | E | A | -2.6201 | |
| 198 | L | A | -1.2169 | |
| 199 | Q | A | -2.5544 | |
| 200 | Q | A | -3.3064 | |
| 201 | D | A | -3.5795 | |
| 202 | R | A | -3.3439 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.1255 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3620 | |
| 211 | S | A | -1.8668 | |
| 212 | T | A | -1.4274 | |
| 213 | R | A | -2.0490 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1553 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3446 | |
| 220 | L | A | 0.6071 | |
| 221 | K | A | -1.1092 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.8157 | |
| 224 | N | A | -1.4978 | |
| 225 | E | A | -1.2403 | |
| 226 | A | A | -0.6028 | |
| 227 | Y | A | -0.3647 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6540 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | 0.0817 | |
| 234 | F | A | 0.2676 | |
| 235 | G | A | -0.8224 | |
| 236 | R | A | -2.6033 | |
| 237 | R | A | -2.8852 | |
| 238 | E | A | -2.1303 | |
| 239 | Q | A | -0.2186 | |
| 240 | V | A | 1.3591 | |
| 241 | Y | A | 1.0697 | |
| 242 | A | A | 0.1098 | |
| 243 | R | A | -1.2096 | |
| 244 | H | A | -1.0153 | |
| 245 | F | A | 0.0672 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | -0.0666 | |
| 248 | R | A | -0.5310 | |
| 249 | A | A | -1.2128 | |
| 250 | G | A | -1.0354 | |
| 251 | P | A | -1.0892 | |
| 252 | D | A | -1.2472 | |
| 253 | G | A | -1.2441 | |
| 254 | H | A | -1.3850 | |
| 255 | P | A | -0.7784 | |
| 256 | L | A | 0.2325 | |
| 257 | P | A | -0.1327 | |
| 258 | S | A | 0.0400 | |
| 259 | A | A | 0.2481 | |
| 260 | P | A | -0.3218 | |
| 261 | P | A | -0.0385 | |
| 262 | P | A | 0.0666 | |
| 263 | S | A | 0.5188 | |
| 264 | P | A | 0.6798 | |
| 265 | L | A | 1.8538 | |
| 266 | Y | A | 1.7091 | |
| 267 | V | A | 1.9175 | |
| 268 | P | A | 1.1655 | |
| 269 | P | A | 0.7588 | |
| 270 | P | A | -0.1196 | |
| 271 | P | A | -0.1026 | |
| 272 | S | A | -0.2857 | |
| 273 | S | A | 0.2985 | |
| 274 | P | A | 0.4821 | |
| 275 | Y | A | 1.7512 | |
| 276 | A | A | 1.3882 | |
| 277 | V | A | 2.3083 | |
| 278 | L | A | 1.8915 | |
| 279 | P | A | 0.2373 | |
| 280 | S | A | 0.0000 | |
| 281 | Y | A | 0.0846 | |
| 282 | D | A | -0.5309 | |
| 283 | Y | A | 1.0030 | |
| 284 | F | A | 0.7489 | |
| 285 | G | A | 0.1920 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.8635 | |
| 291 | L | A | 1.5949 | |
| 292 | V | A | 0.6163 | |
| 293 | S | A | -0.1489 | |
| 294 | S | A | -0.9548 | |
| 295 | D | A | -1.8424 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1107 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6480 | |
| 301 | R | A | -1.8271 | |
| 302 | P | A | -0.9639 | |
| 303 | F | A | -0.1815 | |
| 304 | W | A | -0.5534 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0823 | |
| 307 | R | A | -2.8326 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.2567 | |
| 310 | G | A | -1.2302 | |
| 311 | N | A | -1.2773 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.8489 | |
| 319 | N | A | -0.9479 | |
| 320 | E | A | -1.0453 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3330 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0810 | |
| 333 | N | A | 0.5369 | |
| 334 | F | A | 1.7321 | |
| 335 | T | A | 0.8621 | |
| 336 | I | A | 0.4568 | |
| 337 | S | A | -0.9404 | |
| 338 | Q | A | -1.7542 | |
| 339 | Q | A | -1.3509 | |
| 340 | L | A | 0.6474 | |
| 341 | C | A | 0.4594 | |
| 342 | T | A | 0.5030 | |
| 343 | L | A | 1.1340 | |
| 344 | P | A | 1.0958 | |
| 345 | V | A | 1.8168 | |
| 346 | N | A | 0.6972 | |
| 347 | V | A | 2.1438 | |
| 348 | Y | A | 1.8657 | |
| 349 | D | A | 0.2452 | |
| 350 | P | A | -0.4706 | |
| 351 | S | A | -0.2655 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.7516 | |
| 354 | K | A | -1.7864 | |
| 355 | N | A | -1.7515 | |
| 356 | Y | A | -0.0977 | |
| 357 | L | A | 0.6279 | |
| 358 | R | A | 0.9442 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3679 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0805 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0516 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6928 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.3019 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3107 | |
| 376 | L | A | -1.7091 | |
| 377 | D | A | -1.9816 | |
| 378 | P | A | -1.0328 | |
| 379 | G | A | -1.0601 | |
| 380 | V | A | -0.9283 | |
| 381 | L | A | -0.5313 | |
| 382 | A | A | -0.5203 | |
| 383 | H | A | -0.8409 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4167 | |
| 386 | T | A | -0.5460 | |
| 387 | M | A | -0.2971 | |
| 388 | N | A | -0.8652 | |
| 389 | P | A | -1.2571 | |
| 390 | T | A | -1.4739 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4635 | |
| 393 | E | A | -2.8020 | |
| 394 | N | A | -2.2802 | |
| 395 | W | A | -1.4005 | |
| 396 | N | A | -1.1195 | |
| 397 | L | A | -0.1888 | |
| 398 | G | A | 0.5224 | |
| 399 | F | A | 2.4159 | |
| 400 | V | A | 1.8347 | |
| 401 | P | A | 0.0540 | |
| 402 | P | A | -1.8737 | |
| 403 | K | A | -3.2592 | |
| 404 | E | A | -3.8322 | |
| 405 | R | A | -4.0347 | |
| 406 | E | A | -3.8506 | |
| 407 | D | A | -2.9071 | |
| 408 | P | A | -1.7792 | |
| 409 | Y | A | -0.9894 | |
| 410 | K | A | -2.1201 | |
| 411 | G | A | -0.6341 | |
| 412 | L | A | 0.6811 | |
| 413 | I | A | 1.5918 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3898 | |
| 416 | E | A | -1.6794 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9460 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0521 | |
| 421 | E | A | -2.7830 | |
| 422 | R | A | -2.6399 | |
| 423 | F | A | -1.2847 | |
| 424 | S | A | -1.4711 | |
| 425 | Q | A | -1.8907 | |
| 426 | D | A | -2.9068 | |
| 427 | L | A | -1.9992 | |
| 428 | D | A | -2.8082 | |
| 429 | Q | A | -2.6299 | |
| 430 | F | A | -1.4274 | |
| 431 | A | A | -0.8947 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5646 | |
| 435 | K | A | -0.7146 | |
| 436 | F | A | 0.1418 | |
| 437 | L | A | 1.0283 | |
| 438 | Y | A | 0.8245 | |
| 439 | Q | A | -0.2765 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine