Project name: AAB-PP3121

Status: done

Started: 2026-03-31 14:36:07
Settings
Chain sequence(s) H: QVQLVESGGGVVQPGESLKISCAASGFTFSSYGMHWVRQAPGKGLEWVSAISGSGGTTFYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARSTYYYGASGYDYYFEPWGPGTLVTVSS
L: DIQMTQSPSSLSASVGDRVTITCRASQHIRSSLAWYQQKPGKAPKLLIYGASSRATGIPDRFSGSGSGTDFTLTISSLQPEDFATYYCQHTYITPYTFGQGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:01)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:02)
Show buried residues

Minimal score value
-3.1595
Maximal score value
2.0944
Average score
-0.5681
Total score value
-131.81

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
0 Q H -1.3310
1 V H -0.7437
2 Q H -0.8852
3 L H 0.0000
4 V H 1.3520
5 E H 0.0000
6 S H -0.1149
7 G H -0.7652
8 G H 0.1465
9 G H 0.9292
10 V H 1.5552
11 V H 0.0000
12 Q H -1.7797
13 P H -2.0874
14 G H -2.0512
15 E H -2.2059
16 S H -1.6054
17 L H -1.0035
18 K H -1.9377
19 I H 0.0000
20 S H -0.3116
21 C H 0.0000
22 A H 0.0218
23 A H -0.3912
24 S H -0.5808
25 G H -0.8819
26 F H -0.3097
27 T H -0.1818
28 F H 0.0000
29 S H -0.8416
30 S H -0.1076
31 Y H 0.2249
32 G H 0.0324
33 M H 0.0000
34 H H 0.0000
35 W H 0.0000
36 V H 0.0000
37 R H 0.0000
38 Q H -0.7230
39 A H -1.0395
40 P H -0.9821
41 G H -1.5058
42 K H -2.3903
43 G H -1.6334
44 L H 0.0000
45 E H -1.2556
46 W H 0.0000
47 V H 0.0000
48 S H 0.0000
49 A H 0.0000
50 I H 0.0000
51 S H -0.2688
52 G H -0.5074
53 S H -0.7145
54 G H -0.8100
55 G H -0.7091
56 T H -0.1627
57 T H 0.4215
58 F H 0.9133
59 Y H -0.2051
60 A H -1.1165
61 D H -2.3047
62 S H -1.7165
63 V H 0.0000
64 K H -2.3855
65 G H -1.7008
66 R H -1.2589
67 F H 0.0000
68 T H -0.6427
69 I H 0.0000
70 S H -0.4576
71 R H -1.0928
72 D H -1.6519
73 N H -1.8089
74 S H -1.6345
75 K H -2.4388
76 N H -1.8626
77 T H -1.0000
78 L H 0.0000
79 Y H -0.4585
80 L H 0.0000
81 Q H -1.1285
82 M H 0.0000
83 N H -1.7217
84 S H -1.6493
85 L H 0.0000
86 R H -2.7626
87 A H -1.9110
88 E H -2.3297
89 D H 0.0000
90 T H -0.4277
91 A H 0.0000
92 V H 0.8932
93 Y H 0.0000
94 Y H 0.0000
95 C H 0.0000
96 A H 0.0000
97 R H -0.3095
98 S H 0.0000
99 T H 0.8284
100 Y H 2.0477
101 Y H 1.7650
102 Y H 1.5766
103 G H 0.2750
104 A H -0.0289
105 S H 0.0226
106 G H 0.3150
107 Y H 1.6286
108 D H 1.2692
109 Y H 1.5940
110 Y H 0.6068
111 F H 0.0000
112 E H -0.8118
113 P H -0.8252
114 W H 0.0000
115 G H 0.0000
116 P H -0.3978
117 G H 0.1745
118 T H 0.7525
119 L H 1.7373
120 V H 0.0000
121 T H 0.3746
122 V H 0.0000
123 S H -0.6568
124 S H -0.5924
125 D L -2.0058
126 I L 0.0000
127 Q L -2.1912
128 M L 0.0000
129 T L -1.2841
130 Q L 0.0000
131 S L -0.7328
132 P L -0.5979
133 S L -0.9651
134 S L -1.1332
135 L L -0.6520
136 S L -0.7043
137 A L 0.0000
138 S L -0.1486
139 V L 0.7172
140 G L -0.7084
141 D L -1.6688
142 R L -2.3426
143 V L 0.0000
144 T L -0.6345
145 I L 0.0000
146 T L -0.9693
147 C L 0.0000
148 R L -3.0413
149 A L 0.0000
150 S L -2.2542
151 Q L -2.8557
152 H L -2.5731
153 I L 0.0000
154 R L -2.6053
155 S L -1.5045
156 S L -0.4147
157 L L 0.0000
158 A L 0.0000
159 W L 0.0000
160 Y L 0.0000
161 Q L -1.0266
162 Q L -1.6565
163 K L -2.2092
164 P L -1.4918
165 G L -1.6706
166 K L -2.5638
167 A L -1.5654
168 P L 0.0000
169 K L -2.0067
170 L L 0.0000
171 L L 0.0000
172 I L 0.0000
173 Y L -0.2526
174 G L -0.8978
175 A L 0.0000
176 S L -0.8094
177 S L -0.8492
178 R L -1.6883
179 A L -0.9734
180 T L -0.6028
181 G L -0.9187
182 I L 0.0000
183 P L -1.3872
184 D L -2.3074
185 R L -1.6191
186 F L 0.0000
187 S L -1.0264
188 G L -0.6035
189 S L -0.8346
190 G L -1.4409
191 S L -1.8376
192 G L -2.4349
193 T L -2.6652
194 D L -3.1595
195 F L 0.0000
196 T L -0.9084
197 L L 0.0000
198 T L -0.6133
199 I L 0.0000
200 S L -1.6826
201 S L -1.2898
202 L L 0.0000
203 Q L -0.7796
204 P L -0.6497
205 E L -1.8874
206 D L 0.0000
207 F L -0.5804
208 A L 0.0000
209 T L -1.2871
210 Y L 0.0000
211 Y L 0.0000
212 C L 0.0000
213 Q L 0.0000
214 H L 0.0000
215 T L 1.2617
216 Y L 1.5474
217 I L 2.0944
218 T L 0.8403
219 P L 0.0262
220 Y L 0.0000
221 T L -0.4686
222 F L -0.4887
223 G L 0.0000
224 Q L -1.6086
225 G L 0.0000
226 T L 0.0000
227 K L -2.1581
228 V L 0.0000
229 E L -0.9103
230 I L 0.9383
231 K L -0.7858
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Laboratory of Theory of Biopolymers 2018