| Chain sequence(s) |
A: QVYKGGYARPIPRPPPFVRPLPGGPIGPYNGCPVSCRGISFSQARSCCSRLGRCCHVGKGYSG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:48)
[INFO] Main: Simulation completed successfully. (00:00:49)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -0.2570 | |
| 2 | V | A | 1.3414 | |
| 3 | Y | A | 0.9345 | |
| 4 | K | A | -0.6988 | |
| 5 | G | A | -0.5492 | |
| 6 | G | A | -0.3298 | |
| 7 | Y | A | 0.3974 | |
| 8 | A | A | -0.2916 | |
| 9 | R | A | -1.3514 | |
| 10 | P | A | -0.2867 | |
| 11 | I | A | 0.8403 | |
| 12 | P | A | -0.6495 | |
| 13 | R | A | -1.8338 | |
| 14 | P | A | -0.8995 | |
| 15 | P | A | -0.2515 | |
| 16 | P | A | 0.7104 | |
| 17 | F | A | 2.1528 | |
| 18 | V | A | 1.8229 | |
| 19 | R | A | -0.3580 | |
| 20 | P | A | 0.2187 | |
| 21 | L | A | 0.9073 | |
| 22 | P | A | -0.1407 | |
| 23 | G | A | -0.2165 | |
| 24 | G | A | -0.3235 | |
| 25 | P | A | 0.1963 | |
| 26 | I | A | 1.4390 | |
| 27 | G | A | 0.2935 | |
| 28 | P | A | 0.2577 | |
| 29 | Y | A | 0.6792 | |
| 30 | N | A | -0.8402 | |
| 31 | G | A | -0.9062 | |
| 32 | C | A | -0.2258 | |
| 33 | P | A | 0.1123 | |
| 34 | V | A | 1.2684 | |
| 35 | S | A | 0.0459 | |
| 36 | C | A | -0.5296 | |
| 37 | R | A | -1.4347 | |
| 38 | G | A | -1.1733 | |
| 39 | I | A | -0.6047 | |
| 40 | S | A | -0.0800 | |
| 41 | F | A | 0.8664 | |
| 42 | S | A | -0.3652 | |
| 43 | Q | A | -1.0619 | |
| 44 | A | A | 0.0000 | |
| 45 | R | A | -2.0375 | |
| 46 | S | A | -1.5424 | |
| 47 | C | A | 0.0000 | |
| 48 | C | A | -1.2984 | |
| 49 | S | A | -1.3320 | |
| 50 | R | A | -1.9479 | |
| 51 | L | A | -0.2036 | |
| 52 | G | A | -0.9432 | |
| 53 | R | A | -0.6048 | |
| 54 | C | A | 0.0000 | |
| 55 | C | A | -0.3173 | |
| 56 | H | A | -1.2941 | |
| 57 | V | A | -0.7006 | |
| 58 | G | A | -0.8805 | |
| 59 | K | A | -1.9559 | |
| 60 | G | A | -0.7983 | |
| 61 | Y | A | 0.4338 | |
| 62 | S | A | -0.2661 | |
| 63 | G | A | -0.2956 |