| Chain sequence(s) |
B: SLAAVDAFAKGVEAAGEIALRLAEEAGLDKEKVEKELAKIKEKVAKLKAA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:03)
[INFO] Main: Simulation completed successfully. (00:02:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | B | 0.5038 | |
| 2 | L | B | 1.3244 | |
| 3 | A | B | 0.5422 | |
| 4 | A | B | 0.3082 | |
| 5 | V | B | 0.2992 | |
| 6 | D | B | -0.6972 | |
| 7 | A | B | -0.4544 | |
| 8 | F | B | 0.0439 | |
| 9 | A | B | 0.0000 | |
| 10 | K | B | -2.2567 | |
| 11 | G | B | -1.4756 | |
| 12 | V | B | -1.1608 | |
| 13 | E | B | -2.2565 | |
| 14 | A | B | -1.1559 | |
| 15 | A | B | -0.7071 | |
| 16 | G | B | 0.0000 | |
| 17 | E | B | -1.2677 | |
| 18 | I | B | 0.4834 | |
| 19 | A | B | -0.2433 | |
| 20 | L | B | -1.6158 | |
| 21 | R | B | -1.8350 | |
| 22 | L | B | -0.2531 | |
| 23 | A | B | 0.0000 | |
| 24 | E | B | -2.6990 | |
| 25 | E | B | -2.4221 | |
| 26 | A | B | -1.1871 | |
| 27 | G | B | -1.2455 | |
| 28 | L | B | -0.6747 | |
| 29 | D | B | -2.5230 | |
| 30 | K | B | -3.7753 | |
| 31 | E | B | -4.4423 | |
| 32 | K | B | -4.4234 | |
| 33 | V | B | -3.5199 | |
| 34 | E | B | -4.8553 | |
| 35 | K | B | -4.9150 | |
| 36 | E | B | -4.5415 | |
| 37 | L | B | -3.5922 | |
| 38 | A | B | -3.5832 | |
| 39 | K | B | -3.9810 | |
| 40 | I | B | -2.9622 | |
| 41 | K | B | -3.6956 | |
| 42 | E | B | -4.0887 | |
| 43 | K | B | -3.5412 | |
| 44 | V | B | 0.0000 | |
| 45 | A | B | -2.5536 | |
| 46 | K | B | -2.7805 | |
| 47 | L | B | -1.1434 | |
| 48 | K | B | -1.3139 | |
| 49 | A | B | -0.7657 | |
| 50 | A | B | -0.2352 |