| Chain sequence(s) |
B: LLAADALAAEELERKLNAELPRLMAEGVTRIVWMSSPDEVIATHTIVTLP
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:38)
[INFO] Main: Simulation completed successfully. (00:00:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | B | 1.9419 | |
| 2 | L | B | 1.9871 | |
| 3 | A | B | 1.1992 | |
| 4 | A | B | 0.5696 | |
| 5 | D | B | -0.8133 | |
| 6 | A | B | -0.0313 | |
| 7 | L | B | 0.1678 | |
| 8 | A | B | -1.1158 | |
| 9 | A | B | -1.7585 | |
| 10 | E | B | -3.0579 | |
| 11 | E | B | -3.4842 | |
| 12 | L | B | -2.1435 | |
| 13 | E | B | -3.7500 | |
| 14 | R | B | -4.4898 | |
| 15 | K | B | -3.7297 | |
| 16 | L | B | -2.5610 | |
| 17 | N | B | -2.9885 | |
| 18 | A | B | -2.2199 | |
| 19 | E | B | -2.3464 | |
| 20 | L | B | -1.4764 | |
| 21 | P | B | -1.4113 | |
| 22 | R | B | -2.2957 | |
| 23 | L | B | -1.4593 | |
| 24 | M | B | -0.5191 | |
| 25 | A | B | -1.3316 | |
| 26 | E | B | -2.1055 | |
| 27 | G | B | -1.1569 | |
| 28 | V | B | -0.5734 | |
| 29 | T | B | -0.5146 | |
| 30 | R | B | -1.4504 | |
| 31 | I | B | -0.3255 | |
| 32 | V | B | 1.0343 | |
| 33 | W | B | 1.6692 | |
| 34 | M | B | 1.5223 | |
| 35 | S | B | 0.2449 | |
| 36 | S | B | -0.6535 | |
| 37 | P | B | -1.1920 | |
| 38 | D | B | -2.0921 | |
| 39 | E | B | -1.2226 | |
| 40 | V | B | 1.8194 | |
| 41 | I | B | 2.6326 | |
| 42 | A | B | 1.5380 | |
| 43 | T | B | 0.3947 | |
| 44 | H | B | -0.8935 | |
| 45 | T | B | -0.5141 | |
| 46 | I | B | 0.6699 | |
| 47 | V | B | 1.9123 | |
| 48 | T | B | 1.6312 | |
| 49 | L | B | 1.9282 | |
| 50 | P | B | 0.6787 |