| Chain sequence(s) |
A: MGSSHHHHHHSSGLVPRGSHMRGPNPTAASLEASAGPFTVRSFTVSRPSGYGAGTVYYPTNAGGTVGAIAIVPGYTARQSSIKWWGPRLASHGFVVITIDTNSTLDQPDSRSSQQMAALRQVASLNGTSSSPIYGKVDTARMGVMGWSMGGGGSLISAANNPSLKAAAPQAPWHSSTNFSSVTVPTLIFACENDSIAPVNSSALPIYDSMSRNAKQFLEINGGSHSCANSGNSNQALIGKKGVAWMKRFMDNDTRYSTFACENPNSTRVSDFRTANCSLEDPAANKARKEARLAAATAEQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:54)
[INFO] Main: Simulation completed successfully. (00:04:57)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 0 | M | A | 0.7344 | |
| 1 | G | A | -0.2129 | |
| 2 | S | A | -0.6276 | |
| 3 | S | A | -1.1750 | |
| 4 | H | A | -2.0499 | |
| 5 | H | A | -2.3820 | |
| 6 | H | A | -2.5923 | |
| 7 | H | A | -2.5337 | |
| 8 | H | A | -2.3819 | |
| 9 | H | A | -2.0222 | |
| 10 | S | A | -0.9165 | |
| 11 | S | A | 0.0309 | |
| 12 | G | A | 0.5241 | |
| 13 | L | A | 1.6156 | |
| 14 | V | A | 1.5596 | |
| 15 | P | A | 0.0081 | |
| 16 | R | A | -1.3794 | |
| 17 | G | A | -1.2996 | |
| 18 | S | A | -1.1869 | |
| 19 | H | A | -1.3296 | |
| 20 | M | A | -0.9153 | |
| 21 | R | A | -2.1916 | |
| 22 | G | A | -1.4979 | |
| 23 | P | A | -1.4518 | |
| 24 | N | A | -1.9525 | |
| 25 | P | A | -1.0778 | |
| 26 | T | A | -0.5426 | |
| 27 | A | A | -0.3125 | |
| 28 | A | A | -0.2446 | |
| 29 | S | A | -0.4938 | |
| 30 | L | A | 0.0000 | |
| 31 | E | A | -0.7705 | |
| 32 | A | A | -0.4615 | |
| 33 | S | A | -0.3826 | |
| 34 | A | A | 0.0200 | |
| 35 | G | A | -0.2370 | |
| 36 | P | A | 0.0254 | |
| 37 | F | A | 0.1997 | |
| 38 | T | A | 0.2767 | |
| 39 | V | A | 0.8322 | |
| 40 | R | A | -0.8445 | |
| 41 | S | A | -0.3987 | |
| 42 | F | A | 0.0014 | |
| 43 | T | A | -0.0571 | |
| 44 | V | A | -0.3135 | |
| 45 | S | A | -1.0880 | |
| 46 | R | A | -2.1739 | |
| 47 | P | A | -1.2955 | |
| 48 | S | A | -0.9173 | |
| 49 | G | A | -0.8821 | |
| 50 | Y | A | 0.0000 | |
| 51 | G | A | -1.2853 | |
| 52 | A | A | -1.2602 | |
| 53 | G | A | 0.0000 | |
| 54 | T | A | -0.1090 | |
| 55 | V | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Y | A | -0.2228 | |
| 58 | P | A | 0.0000 | |
| 59 | T | A | -0.7569 | |
| 60 | N | A | -1.3334 | |
| 61 | A | A | -0.9247 | |
| 62 | G | A | -1.1410 | |
| 63 | G | A | -1.3262 | |
| 64 | T | A | -0.9107 | |
| 65 | V | A | 0.0000 | |
| 66 | G | A | 0.0000 | |
| 67 | A | A | 0.0000 | |
| 68 | I | A | 0.0000 | |
| 69 | A | A | 0.0000 | |
| 70 | I | A | 0.0000 | |
| 71 | V | A | 0.0000 | |
| 72 | P | A | 0.0000 | |
| 73 | G | A | 0.0000 | |
| 74 | Y | A | 0.3598 | |
| 75 | T | A | 0.1323 | |
| 76 | A | A | -0.7002 | |
| 77 | R | A | -2.1989 | |
| 78 | Q | A | -1.5134 | |
| 79 | S | A | -1.3086 | |
| 80 | S | A | -1.0738 | |
| 81 | I | A | 0.0000 | |
| 82 | K | A | -1.2853 | |
| 83 | W | A | -0.5368 | |
| 84 | W | A | 0.0000 | |
| 85 | G | A | 0.0000 | |
| 86 | P | A | -0.1281 | |
| 87 | R | A | 0.0000 | |
| 88 | L | A | 0.0000 | |
| 89 | A | A | 0.0000 | |
| 90 | S | A | 0.0821 | |
| 91 | H | A | -0.1316 | |
| 92 | G | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | V | A | 0.0000 | |
| 95 | V | A | 0.0000 | |
| 96 | I | A | 0.0000 | |
| 97 | T | A | 0.0000 | |
| 98 | I | A | 0.0000 | |
| 99 | D | A | -1.3251 | |
| 100 | T | A | 0.0000 | |
| 101 | N | A | -1.1986 | |
| 102 | S | A | -0.3764 | |
| 103 | T | A | 0.0163 | |
| 104 | L | A | 1.0729 | |
| 105 | D | A | -0.5253 | |
| 106 | Q | A | -1.5645 | |
| 107 | P | A | 0.0000 | |
| 108 | D | A | -2.2622 | |
| 109 | S | A | -1.4096 | |
| 110 | R | A | 0.0000 | |
| 111 | S | A | 0.0000 | |
| 112 | S | A | -0.6525 | |
| 113 | Q | A | 0.0000 | |
| 114 | Q | A | 0.0000 | |
| 115 | M | A | -0.5155 | |
| 116 | A | A | -0.8188 | |
| 117 | A | A | 0.0000 | |
| 118 | L | A | 0.0000 | |
| 119 | R | A | -1.9471 | |
| 120 | Q | A | -1.2179 | |
| 121 | V | A | 0.0000 | |
| 122 | A | A | -0.9365 | |
| 123 | S | A | -0.7302 | |
| 124 | L | A | -0.2696 | |
| 125 | N | A | -0.4150 | |
| 126 | G | A | -0.4099 | |
| 127 | T | A | -0.1594 | |
| 128 | S | A | -0.1162 | |
| 129 | S | A | -0.1352 | |
| 130 | S | A | 0.0270 | |
| 131 | P | A | 0.1664 | |
| 132 | I | A | 0.0000 | |
| 133 | Y | A | 0.6229 | |
| 134 | G | A | -0.2675 | |
| 135 | K | A | -0.5641 | |
| 136 | V | A | 0.0000 | |
| 137 | D | A | -0.7954 | |
| 138 | T | A | -0.6561 | |
| 139 | A | A | -0.3533 | |
| 140 | R | A | -0.6967 | |
| 141 | M | A | 0.0000 | |
| 142 | G | A | 0.0000 | |
| 143 | V | A | 0.0000 | |
| 144 | M | A | 0.0000 | |
| 145 | G | A | 0.0000 | |
| 146 | W | A | 0.2490 | |
| 147 | S | A | 0.0000 | |
| 148 | M | A | -0.2362 | |
| 149 | G | A | 0.0000 | |
| 150 | G | A | 0.0000 | |
| 151 | G | A | 0.0000 | |
| 152 | G | A | 0.0000 | |
| 153 | S | A | 0.0000 | |
| 154 | L | A | 0.0000 | |
| 155 | I | A | -0.5859 | |
| 156 | S | A | 0.0000 | |
| 157 | A | A | 0.0000 | |
| 158 | A | A | -0.7790 | |
| 159 | N | A | -1.4683 | |
| 160 | N | A | -1.1268 | |
| 161 | P | A | -0.9784 | |
| 162 | S | A | -0.7805 | |
| 163 | L | A | 0.0000 | |
| 164 | K | A | -0.9279 | |
| 165 | A | A | 0.0000 | |
| 166 | A | A | 0.0000 | |
| 167 | A | A | 0.0000 | |
| 168 | P | A | 0.0000 | |
| 169 | Q | A | 0.0000 | |
| 170 | A | A | 0.0000 | |
| 171 | P | A | 0.0000 | |
| 172 | W | A | 0.2697 | |
| 173 | H | A | -0.4993 | |
| 174 | S | A | -0.5140 | |
| 175 | S | A | -0.6899 | |
| 176 | T | A | -0.8981 | |
| 177 | N | A | -1.7131 | |
| 178 | F | A | 0.0000 | |
| 179 | S | A | -1.2432 | |
| 180 | S | A | -0.9740 | |
| 181 | V | A | 0.0000 | |
| 182 | T | A | -1.1633 | |
| 183 | V | A | 0.0000 | |
| 184 | P | A | -0.6416 | |
| 185 | T | A | 0.0000 | |
| 186 | L | A | 0.0000 | |
| 187 | I | A | 0.0000 | |
| 188 | F | A | 0.0000 | |
| 189 | A | A | 0.0000 | |
| 190 | C | A | 0.0000 | |
| 191 | E | A | -2.7888 | |
| 192 | N | A | -2.2896 | |
| 193 | D | A | 0.0000 | |
| 194 | S | A | -0.3522 | |
| 195 | I | A | 0.6285 | |
| 196 | A | A | 0.0000 | |
| 197 | P | A | -0.8161 | |
| 198 | V | A | 0.0000 | |
| 199 | N | A | -1.5346 | |
| 200 | S | A | -0.9076 | |
| 201 | S | A | 0.0000 | |
| 202 | A | A | 0.0000 | |
| 203 | L | A | -0.9453 | |
| 204 | P | A | -1.2719 | |
| 205 | I | A | 0.0000 | |
| 206 | Y | A | 0.0000 | |
| 207 | D | A | -2.1769 | |
| 208 | S | A | -1.6343 | |
| 209 | M | A | 0.0000 | |
| 210 | S | A | -1.8432 | |
| 211 | R | A | -2.6537 | |
| 212 | N | A | -2.1735 | |
| 213 | A | A | -1.0438 | |
| 214 | K | A | 0.0000 | |
| 215 | Q | A | 0.0000 | |
| 216 | F | A | 0.0000 | |
| 217 | L | A | 0.0000 | |
| 218 | E | A | -1.4523 | |
| 219 | I | A | 0.0000 | |
| 220 | N | A | -2.6341 | |
| 221 | G | A | -2.0862 | |
| 222 | G | A | 0.0000 | |
| 223 | S | A | -1.1641 | |
| 224 | H | A | 0.0000 | |
| 225 | S | A | -0.2201 | |
| 226 | C | A | 0.0000 | |
| 227 | A | A | 0.0000 | |
| 228 | N | A | 0.0000 | |
| 229 | S | A | -0.7465 | |
| 230 | G | A | -0.7929 | |
| 231 | N | A | -0.7734 | |
| 232 | S | A | -0.7915 | |
| 233 | N | A | -1.0292 | |
| 234 | Q | A | -0.6780 | |
| 235 | A | A | -0.5701 | |
| 236 | L | A | 0.0000 | |
| 237 | I | A | 0.0000 | |
| 238 | G | A | 0.0000 | |
| 239 | K | A | -0.4464 | |
| 240 | K | A | 0.0000 | |
| 241 | G | A | 0.0000 | |
| 242 | V | A | 0.0000 | |
| 243 | A | A | 0.0000 | |
| 244 | W | A | 0.0000 | |
| 245 | M | A | 0.0000 | |
| 246 | K | A | -0.6983 | |
| 247 | R | A | -0.8865 | |
| 248 | F | A | -0.6825 | |
| 249 | M | A | 0.0000 | |
| 250 | D | A | -1.2347 | |
| 251 | N | A | -1.7638 | |
| 252 | D | A | -1.5712 | |
| 253 | T | A | -1.2770 | |
| 254 | R | A | -1.3266 | |
| 255 | Y | A | 0.0000 | |
| 256 | S | A | -0.9252 | |
| 257 | T | A | -0.8082 | |
| 258 | F | A | -0.6029 | |
| 259 | A | A | 0.0000 | |
| 260 | C | A | -0.9192 | |
| 261 | E | A | -2.0254 | |
| 262 | N | A | -2.1974 | |
| 263 | P | A | -1.7734 | |
| 264 | N | A | -1.9888 | |
| 265 | S | A | -1.3410 | |
| 266 | T | A | -1.3319 | |
| 267 | R | A | -2.2739 | |
| 268 | V | A | -1.7127 | |
| 269 | S | A | -1.3867 | |
| 270 | D | A | -1.3288 | |
| 271 | F | A | -1.0413 | |
| 272 | R | A | -1.2631 | |
| 273 | T | A | -0.9883 | |
| 274 | A | A | -1.1437 | |
| 275 | N | A | -0.8782 | |
| 276 | C | A | -0.6162 | |
| 277 | S | A | -1.0067 | |
| 278 | L | A | -1.1348 | |
| 279 | E | A | -2.6353 | |
| 280 | D | A | -2.4128 | |
| 281 | P | A | -1.9579 | |
| 282 | A | A | -1.8534 | |
| 283 | A | A | -2.7696 | |
| 284 | N | A | -3.9838 | |
| 285 | K | A | -4.1171 | |
| 286 | A | A | -3.3194 | |
| 287 | R | A | -4.2962 | |
| 288 | K | A | -4.1661 | |
| 289 | E | A | -3.7709 | |
| 290 | A | A | -2.7302 | |
| 291 | R | A | -2.5526 | |
| 292 | L | A | -0.5144 | |
| 293 | A | A | -0.8527 | |
| 294 | A | A | -0.8436 | |
| 295 | A | A | -0.6728 | |
| 296 | T | A | -0.8236 | |
| 297 | A | A | -1.0075 | |
| 298 | E | A | -2.3661 | |
| 299 | Q | A | -2.0739 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine