| Chain sequence(s) |
H: EVQLVESGGGVVQPGGSLRLSCVASGFSFSDFGMNWVRQAPGKGLEWVAFVPFDRRINYYAESVRGRFTISRDDSKNTVFLQMDSLRPEDTAIYYCAKHRSQWNFWPREGGLDHWGQGTLVTVSS
L: QSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYRQHPGEAPKAIIFDVTNRPSGISNRFSGSKFGNTASLTISGLQAEDEADYYCAAYTVASTLLFGGGTK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:19)
[INFO] Main: Simulation completed successfully. (00:01:20)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9748 | |
| 2 | V | H | -1.1996 | |
| 3 | Q | H | -0.8744 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.5172 | |
| 6 | E | H | 0.5737 | |
| 7 | S | H | 0.1157 | |
| 8 | G | H | -0.5741 | |
| 9 | G | H | 0.2486 | |
| 11 | G | H | 0.8139 | |
| 12 | V | H | 1.6627 | |
| 13 | V | H | 0.0907 | |
| 14 | Q | H | -1.2865 | |
| 15 | P | H | -1.5883 | |
| 16 | G | H | -1.4098 | |
| 17 | G | H | -1.1832 | |
| 18 | S | H | -1.1156 | |
| 19 | L | H | -0.5605 | |
| 20 | R | H | -1.1781 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | 0.1282 | |
| 23 | C | H | 0.0000 | |
| 24 | V | H | 0.8928 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -0.5927 | |
| 27 | G | H | -1.0942 | |
| 28 | F | H | -0.4976 | |
| 29 | S | H | -0.4450 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.6463 | |
| 36 | D | H | -0.1782 | |
| 37 | F | H | 0.0449 | |
| 38 | G | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | 0.0000 | |
| 45 | A | H | -0.9423 | |
| 46 | P | H | -0.7761 | |
| 47 | G | H | -1.4254 | |
| 48 | K | H | -2.2291 | |
| 49 | G | H | -1.4458 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.9253 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | F | H | 0.0000 | |
| 56 | V | H | 0.0000 | |
| 57 | P | H | 0.0000 | |
| 58 | F | H | -0.3669 | |
| 59 | D | H | -1.2981 | |
| 62 | R | H | -2.7083 | |
| 63 | R | H | -2.5203 | |
| 64 | I | H | -0.8383 | |
| 65 | N | H | -0.7697 | |
| 66 | Y | H | -0.2465 | |
| 67 | Y | H | -0.8406 | |
| 68 | A | H | 0.0000 | |
| 69 | E | H | -2.4930 | |
| 70 | S | H | -1.8526 | |
| 71 | V | H | 0.0000 | |
| 72 | R | H | -2.3021 | |
| 74 | G | H | -1.6756 | |
| 75 | R | H | -1.3560 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.7445 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.7153 | |
| 80 | R | H | 0.0000 | |
| 81 | D | H | -1.4064 | |
| 82 | D | H | -1.6033 | |
| 83 | S | H | -1.5092 | |
| 84 | K | H | -2.1372 | |
| 85 | N | H | -1.4209 | |
| 86 | T | H | 0.0000 | |
| 87 | V | H | 0.0000 | |
| 88 | F | H | 0.0141 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.7763 | |
| 91 | M | H | 0.0000 | |
| 92 | D | H | -1.3929 | |
| 93 | S | H | -1.2411 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.3216 | |
| 96 | P | H | -1.9197 | |
| 97 | E | H | -2.3318 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.3779 | |
| 100 | A | H | 0.0000 | |
| 101 | I | H | 0.7808 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | K | H | 0.0000 | |
| 107 | H | H | 0.0000 | |
| 108 | R | H | -0.9522 | |
| 109 | S | H | -0.5304 | |
| 110 | Q | H | -0.4305 | |
| 111 | W | H | 0.8377 | |
| 111A | N | H | 0.4082 | |
| 111B | F | H | 0.4612 | |
| 112C | W | H | 0.6716 | |
| 112B | P | H | 0.0000 | |
| 112A | R | H | -0.5882 | |
| 112 | E | H | -0.9479 | |
| 113 | G | H | 0.0000 | |
| 114 | G | H | 0.0000 | |
| 115 | L | H | 0.0000 | |
| 116 | D | H | -0.9698 | |
| 117 | H | H | -1.1512 | |
| 118 | W | H | -0.7517 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.1958 | |
| 121 | G | H | -0.1296 | |
| 122 | T | H | 0.5001 | |
| 123 | L | H | 1.4780 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.4047 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7708 | |
| 128 | S | H | -0.7270 | |
| 1 | Q | L | -1.4087 | |
| 2 | S | L | -0.6786 | |
| 3 | A | L | -0.5148 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.3362 | |
| 6 | Q | L | -0.5777 | |
| 7 | P | L | -0.4966 | |
| 8 | A | L | -0.6244 | |
| 9 | S | L | -0.8928 | |
| 11 | V | L | -0.5280 | |
| 12 | S | L | -0.9254 | |
| 13 | G | L | -0.9898 | |
| 14 | S | L | -0.9665 | |
| 15 | P | L | -1.4019 | |
| 16 | G | L | -1.4363 | |
| 17 | Q | L | -1.7967 | |
| 18 | S | L | -1.0950 | |
| 19 | I | L | -0.2960 | |
| 20 | T | L | -0.0546 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.2121 | |
| 23 | C | L | 0.0000 | |
| 24 | T | L | -0.2778 | |
| 25 | G | L | -0.5768 | |
| 26 | T | L | -0.7085 | |
| 27 | S | L | -0.5647 | |
| 28 | S | L | 0.0919 | |
| 29 | D | L | 0.0000 | |
| 30 | V | L | 0.0000 | |
| 31 | G | L | -0.8294 | |
| 35 | G | L | -0.6840 | |
| 36 | Y | L | -0.5537 | |
| 37 | N | L | -1.4459 | |
| 38 | Y | L | -0.7262 | |
| 39 | V | L | 0.0000 | |
| 40 | S | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | R | L | -1.1195 | |
| 44 | Q | L | 0.0000 | |
| 45 | H | L | -1.9071 | |
| 46 | P | L | -1.2263 | |
| 47 | G | L | -1.3956 | |
| 48 | E | L | -2.0575 | |
| 49 | A | L | -1.5416 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.4575 | |
| 52 | A | L | 0.0000 | |
| 53 | I | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | F | L | 0.0000 | |
| 56 | D | L | -1.3066 | |
| 57 | V | L | 0.0000 | |
| 65 | T | L | -1.2182 | |
| 66 | N | L | -1.7921 | |
| 67 | R | L | -1.5661 | |
| 68 | P | L | -1.0532 | |
| 69 | S | L | -0.7168 | |
| 70 | G | L | -0.5951 | |
| 71 | I | L | -0.4288 | |
| 72 | S | L | -0.8194 | |
| 74 | N | L | -1.5779 | |
| 75 | R | L | -1.0626 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.9032 | |
| 78 | G | L | 0.0000 | |
| 79 | S | L | -0.3040 | |
| 80 | K | L | 0.0105 | |
| 83 | F | L | 1.2843 | |
| 84 | G | L | -0.1507 | |
| 85 | N | L | -0.7791 | |
| 86 | T | L | -0.1500 | |
| 87 | A | L | 0.0000 | |
| 88 | S | L | 0.0160 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.2000 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.0128 | |
| 93 | G | L | -1.1247 | |
| 94 | L | L | -1.5850 | |
| 95 | Q | L | -1.9775 | |
| 96 | A | L | -1.7707 | |
| 97 | E | L | -2.6240 | |
| 98 | D | L | 0.0000 | |
| 99 | E | L | -3.0203 | |
| 100 | A | L | 0.0000 | |
| 101 | D | L | -1.5799 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | A | L | 0.0000 | |
| 106 | A | L | 0.0000 | |
| 107 | Y | L | 0.0000 | |
| 108 | T | L | 0.0000 | |
| 109 | V | L | 1.6994 | |
| 113 | A | L | 0.6329 | |
| 114 | S | L | 0.7683 | |
| 115 | T | L | 0.0000 | |
| 116 | L | L | 0.0000 | |
| 117 | L | L | -0.2318 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.9777 | |
| 121 | G | L | -1.1324 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -2.2723 |