| Chain sequence(s) |
B: GELRAAMDEYKKRVKTMVELYGELVSEETRKKIEEKAKKMIAEMEARFKA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:49)
[INFO] Main: Simulation completed successfully. (00:02:50)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | B | -1.3803 | |
| 2 | E | B | -2.0169 | |
| 3 | L | B | -0.8865 | |
| 4 | R | B | -2.6539 | |
| 5 | A | B | -2.1891 | |
| 6 | A | B | -1.8080 | |
| 7 | M | B | 0.0000 | |
| 8 | D | B | -3.9893 | |
| 9 | E | B | -3.8382 | |
| 10 | Y | B | -2.9465 | |
| 11 | K | B | -3.7223 | |
| 12 | K | B | -4.3025 | |
| 13 | R | B | -3.9725 | |
| 14 | V | B | 0.0000 | |
| 15 | K | B | -3.1496 | |
| 16 | T | B | -1.7243 | |
| 17 | M | B | -0.8416 | |
| 18 | V | B | 0.0000 | |
| 19 | E | B | -1.6532 | |
| 20 | L | B | 0.8708 | |
| 21 | Y | B | 0.9304 | |
| 22 | G | B | 0.0000 | |
| 23 | E | B | -1.0263 | |
| 24 | L | B | 0.8628 | |
| 25 | V | B | -0.2174 | |
| 26 | S | B | -1.9866 | |
| 27 | E | B | -3.7271 | |
| 28 | E | B | -3.9890 | |
| 29 | T | B | -3.0479 | |
| 30 | R | B | -4.0071 | |
| 31 | K | B | -4.8813 | |
| 32 | K | B | -4.8176 | |
| 33 | I | B | -3.6910 | |
| 34 | E | B | -4.5897 | |
| 35 | E | B | -4.9036 | |
| 36 | K | B | -4.4894 | |
| 37 | A | B | 0.0000 | |
| 38 | K | B | -4.3158 | |
| 39 | K | B | -3.9778 | |
| 40 | M | B | -2.5297 | |
| 41 | I | B | -2.5533 | |
| 42 | A | B | -2.3997 | |
| 43 | E | B | -3.0881 | |
| 44 | M | B | -2.1574 | |
| 45 | E | B | -2.7146 | |
| 46 | A | B | -2.1396 | |
| 47 | R | B | -2.6755 | |
| 48 | F | B | -1.5094 | |
| 49 | K | B | -2.3335 | |
| 50 | A | B | -1.2604 |