| Chain sequence(s) |
A: GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSWDERTKEEVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVEASEWWQGEWFSCSVMHEALHNHYTQKSLRRSPGK
B: GPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSWDERTKEEVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVEASEWWQGEWFSCSVMHEALHNHYTQKSLRRSPGK input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:53)
[INFO] Main: Simulation completed successfully. (00:05:56)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.6657 | |
| 2 | P | A | 0.0000 | |
| 3 | S | A | -0.0539 | |
| 4 | V | A | 0.0000 | |
| 5 | F | A | 1.2237 | |
| 6 | L | A | 0.8675 | |
| 7 | F | A | 1.1215 | |
| 8 | P | A | -0.1403 | |
| 9 | P | A | 0.0000 | |
| 10 | K | A | -2.0567 | |
| 11 | P | A | -1.4911 | |
| 12 | K | A | -1.3021 | |
| 13 | D | A | -1.1613 | |
| 14 | T | A | 0.0000 | |
| 15 | L | A | 0.0000 | |
| 16 | M | A | 0.2879 | |
| 17 | I | A | 1.3700 | |
| 18 | S | A | 0.1905 | |
| 19 | R | A | -0.8325 | |
| 20 | T | A | -0.5147 | |
| 21 | P | A | 0.0000 | |
| 22 | E | A | -0.6203 | |
| 23 | V | A | 0.0000 | |
| 24 | T | A | 0.2936 | |
| 25 | C | A | 0.0000 | |
| 26 | V | A | 0.0000 | |
| 27 | V | A | 0.0000 | |
| 28 | V | A | -0.8592 | |
| 29 | D | A | -1.5801 | |
| 30 | V | A | 0.0000 | |
| 31 | S | A | -2.1010 | |
| 32 | H | A | -2.6418 | |
| 33 | E | A | -2.9780 | |
| 34 | D | A | -2.6119 | |
| 35 | P | A | -2.7007 | |
| 36 | E | A | -3.1033 | |
| 37 | V | A | -1.9943 | |
| 38 | K | A | -2.2381 | |
| 39 | F | A | -1.1712 | |
| 40 | N | A | -1.2664 | |
| 41 | W | A | 0.0000 | |
| 42 | Y | A | -0.9657 | |
| 43 | V | A | -1.0786 | |
| 44 | D | A | -2.2670 | |
| 45 | G | A | -1.0828 | |
| 46 | V | A | 0.2048 | |
| 47 | E | A | -1.4421 | |
| 48 | V | A | -0.8226 | |
| 49 | H | A | -1.9892 | |
| 50 | N | A | -2.1996 | |
| 51 | A | A | -1.7606 | |
| 52 | K | A | -2.3402 | |
| 53 | T | A | -1.9201 | |
| 54 | K | A | -2.2946 | |
| 55 | P | A | -2.2319 | |
| 56 | R | A | -3.2100 | |
| 57 | E | A | -3.3804 | |
| 58 | E | A | -3.2918 | |
| 59 | Q | A | -1.8591 | |
| 60 | Y | A | 0.2102 | |
| 61 | N | A | -0.7916 | |
| 62 | S | A | -1.0959 | |
| 63 | T | A | -1.9741 | |
| 64 | Y | A | 0.0000 | |
| 65 | R | A | -2.2470 | |
| 66 | V | A | 0.0000 | |
| 67 | V | A | 0.0000 | |
| 68 | S | A | 0.0000 | |
| 69 | V | A | 0.0000 | |
| 70 | L | A | 0.0000 | |
| 71 | T | A | -0.4205 | |
| 72 | V | A | 0.0000 | |
| 73 | L | A | 0.8276 | |
| 74 | H | A | 0.0000 | |
| 75 | Q | A | -0.9309 | |
| 76 | D | A | -1.2609 | |
| 77 | W | A | 0.0000 | |
| 78 | L | A | -0.9075 | |
| 79 | N | A | -2.0103 | |
| 80 | G | A | -2.0689 | |
| 81 | K | A | -2.1188 | |
| 82 | E | A | -2.0880 | |
| 83 | Y | A | 0.0000 | |
| 84 | K | A | -1.7033 | |
| 85 | C | A | 0.0000 | |
| 86 | K | A | -1.5044 | |
| 87 | V | A | 0.0000 | |
| 88 | S | A | -1.4496 | |
| 89 | N | A | 0.0000 | |
| 90 | K | A | -2.5319 | |
| 91 | A | A | -1.4427 | |
| 92 | L | A | -0.6054 | |
| 93 | P | A | -0.5057 | |
| 94 | A | A | -0.4107 | |
| 95 | P | A | -0.8440 | |
| 96 | I | A | -0.5847 | |
| 97 | E | A | -1.8757 | |
| 98 | K | A | -1.1787 | |
| 99 | T | A | -0.9844 | |
| 100 | I | A | -0.2330 | |
| 101 | S | A | -1.1279 | |
| 102 | K | A | -1.2494 | |
| 103 | A | A | -1.1631 | |
| 104 | K | A | -2.3538 | |
| 105 | G | A | -2.0275 | |
| 106 | Q | A | -2.2271 | |
| 107 | P | A | -1.9637 | |
| 108 | R | A | -2.4521 | |
| 109 | E | A | -2.8185 | |
| 110 | P | A | 0.0000 | |
| 111 | Q | A | -1.2298 | |
| 112 | V | A | 0.0000 | |
| 113 | Y | A | 0.0000 | |
| 114 | T | A | 0.0000 | |
| 115 | L | A | 0.0000 | |
| 116 | P | A | -0.2420 | |
| 117 | P | A | -0.4352 | |
| 118 | S | A | -0.1312 | |
| 119 | W | A | 0.2073 | |
| 120 | D | A | -1.2478 | |
| 121 | E | A | 0.0000 | |
| 122 | R | A | -1.5715 | |
| 123 | T | A | -1.5084 | |
| 124 | K | A | -2.7381 | |
| 125 | E | A | -3.4864 | |
| 126 | E | A | -3.5090 | |
| 127 | V | A | 0.0000 | |
| 128 | S | A | 0.0000 | |
| 129 | L | A | 0.0000 | |
| 130 | T | A | 0.0000 | |
| 131 | C | A | 0.0000 | |
| 132 | L | A | 0.0000 | |
| 133 | V | A | 0.0000 | |
| 134 | K | A | 0.0000 | |
| 135 | G | A | -0.9990 | |
| 136 | F | A | 0.0000 | |
| 137 | Y | A | -1.1901 | |
| 138 | P | A | 0.0000 | |
| 139 | S | A | -0.2015 | |
| 140 | D | A | -1.1367 | |
| 141 | I | A | 0.0000 | |
| 142 | A | A | -0.6430 | |
| 143 | V | A | 0.0000 | |
| 144 | E | A | -0.9251 | |
| 145 | W | A | 0.0000 | |
| 146 | E | A | -1.6187 | |
| 147 | S | A | -1.3345 | |
| 148 | N | A | -1.8986 | |
| 149 | G | A | -1.7372 | |
| 150 | Q | A | -2.2784 | |
| 151 | P | A | -1.9054 | |
| 152 | E | A | -1.9248 | |
| 153 | N | A | -2.1056 | |
| 154 | N | A | -1.5414 | |
| 155 | Y | A | -0.9652 | |
| 156 | K | A | -0.6591 | |
| 157 | T | A | -0.1821 | |
| 158 | T | A | 0.0000 | |
| 159 | P | A | -0.1122 | |
| 160 | P | A | 0.2284 | |
| 161 | V | A | 0.7462 | |
| 162 | L | A | 1.1173 | |
| 163 | D | A | -0.2928 | |
| 164 | S | A | -1.0625 | |
| 165 | D | A | -1.8716 | |
| 166 | G | A | -0.8521 | |
| 167 | S | A | 0.0000 | |
| 168 | F | A | 0.2678 | |
| 169 | F | A | 0.0000 | |
| 170 | L | A | 0.0000 | |
| 171 | Y | A | 0.0000 | |
| 172 | S | A | 0.0000 | |
| 173 | K | A | 0.0000 | |
| 174 | L | A | 0.0000 | |
| 175 | T | A | -1.1937 | |
| 176 | V | A | 0.0000 | |
| 177 | E | A | -3.2849 | |
| 178 | A | A | 0.0000 | |
| 179 | S | A | -2.1352 | |
| 180 | E | A | -2.2965 | |
| 181 | W | A | 0.0000 | |
| 182 | W | A | -1.3279 | |
| 183 | Q | A | -1.7018 | |
| 184 | G | A | -1.3349 | |
| 185 | E | A | -1.2487 | |
| 186 | W | A | -0.3677 | |
| 187 | F | A | 0.0000 | |
| 188 | S | A | -0.9311 | |
| 189 | C | A | 0.0000 | |
| 190 | S | A | 0.0000 | |
| 191 | V | A | 0.0000 | |
| 192 | M | A | 0.0000 | |
| 193 | H | A | 0.0000 | |
| 194 | E | A | -1.2079 | |
| 195 | A | A | -1.6880 | |
| 196 | L | A | 0.0000 | |
| 197 | H | A | -1.8245 | |
| 198 | N | A | -1.4957 | |
| 199 | H | A | -1.0198 | |
| 200 | Y | A | -0.4977 | |
| 201 | T | A | -0.7757 | |
| 202 | Q | A | -1.0883 | |
| 203 | K | A | -1.0581 | |
| 204 | S | A | -0.5722 | |
| 205 | L | A | 0.0000 | |
| 206 | R | A | -1.1744 | |
| 207 | R | A | -1.4671 | |
| 208 | S | A | -1.1704 | |
| 209 | P | A | -1.3558 | |
| 210 | G | A | -1.5949 | |
| 211 | K | A | -2.0172 | |
| 1 | G | B | -0.6715 | |
| 2 | P | B | 0.0000 | |
| 3 | S | B | -0.1220 | |
| 4 | V | B | 0.0000 | |
| 5 | F | B | 1.0927 | |
| 6 | L | B | 0.8264 | |
| 7 | F | B | 1.1259 | |
| 8 | P | B | -0.1136 | |
| 9 | P | B | 0.0000 | |
| 10 | K | B | -1.9985 | |
| 11 | P | B | -1.3845 | |
| 12 | K | B | -1.2689 | |
| 13 | D | B | -1.2772 | |
| 14 | T | B | 0.0000 | |
| 15 | L | B | 0.0000 | |
| 16 | M | B | 0.1887 | |
| 17 | I | B | 1.2119 | |
| 18 | S | B | -0.0061 | |
| 19 | R | B | -1.2377 | |
| 20 | T | B | -0.7346 | |
| 21 | P | B | 0.0000 | |
| 22 | E | B | -0.6862 | |
| 23 | V | B | 0.0000 | |
| 24 | T | B | 0.3397 | |
| 25 | C | B | 0.0000 | |
| 26 | V | B | 0.0000 | |
| 27 | V | B | 0.0000 | |
| 28 | V | B | -0.9622 | |
| 29 | D | B | -1.5866 | |
| 30 | V | B | 0.0000 | |
| 31 | S | B | -2.1134 | |
| 32 | H | B | -2.6256 | |
| 33 | E | B | -2.9567 | |
| 34 | D | B | -2.5675 | |
| 35 | P | B | -2.6836 | |
| 36 | E | B | -3.0773 | |
| 37 | V | B | -1.9638 | |
| 38 | K | B | -2.2398 | |
| 39 | F | B | -1.1599 | |
| 40 | N | B | -1.1534 | |
| 41 | W | B | 0.0000 | |
| 42 | Y | B | -0.6610 | |
| 43 | V | B | -0.8903 | |
| 44 | D | B | -2.1824 | |
| 45 | G | B | -0.9073 | |
| 46 | V | B | 0.5597 | |
| 47 | E | B | -0.7032 | |
| 48 | V | B | -0.5518 | |
| 49 | H | B | -1.8646 | |
| 50 | N | B | -2.1387 | |
| 51 | A | B | -1.7818 | |
| 52 | K | B | -2.2989 | |
| 53 | T | B | -1.9042 | |
| 54 | K | B | -2.4661 | |
| 55 | P | B | -2.3849 | |
| 56 | R | B | -3.3859 | |
| 57 | E | B | -3.8020 | |
| 58 | E | B | -3.3676 | |
| 59 | Q | B | -1.6076 | |
| 60 | Y | B | 0.4006 | |
| 61 | N | B | -0.6929 | |
| 62 | S | B | -0.9852 | |
| 63 | T | B | -1.9616 | |
| 64 | Y | B | 0.0000 | |
| 65 | R | B | -2.4720 | |
| 66 | V | B | 0.0000 | |
| 67 | V | B | -0.9275 | |
| 68 | S | B | 0.0000 | |
| 69 | V | B | 0.0000 | |
| 70 | L | B | 0.0000 | |
| 71 | T | B | -0.4622 | |
| 72 | V | B | 0.0000 | |
| 73 | L | B | 0.6127 | |
| 74 | H | B | 0.0000 | |
| 75 | Q | B | -1.2064 | |
| 76 | D | B | -1.5042 | |
| 77 | W | B | 0.0000 | |
| 78 | L | B | -1.0278 | |
| 79 | N | B | -2.1423 | |
| 80 | G | B | -2.1918 | |
| 81 | K | B | -2.2406 | |
| 82 | E | B | -2.1727 | |
| 83 | Y | B | 0.0000 | |
| 84 | K | B | -1.6410 | |
| 85 | C | B | 0.0000 | |
| 86 | K | B | -1.5706 | |
| 87 | V | B | 0.0000 | |
| 88 | S | B | -1.4666 | |
| 89 | N | B | 0.0000 | |
| 90 | K | B | -2.5174 | |
| 91 | A | B | -1.4275 | |
| 92 | L | B | -0.5914 | |
| 93 | P | B | -0.5017 | |
| 94 | A | B | -0.4182 | |
| 95 | P | B | -0.8694 | |
| 96 | I | B | -0.6549 | |
| 97 | E | B | -2.0035 | |
| 98 | K | B | -1.2591 | |
| 99 | T | B | -1.0329 | |
| 100 | I | B | -0.2260 | |
| 101 | S | B | -1.1593 | |
| 102 | K | B | -1.2759 | |
| 103 | A | B | -1.1636 | |
| 104 | K | B | -2.3627 | |
| 105 | G | B | -1.9689 | |
| 106 | Q | B | -2.1067 | |
| 107 | P | B | -1.7125 | |
| 108 | R | B | -1.9693 | |
| 109 | E | B | -2.5497 | |
| 110 | P | B | 0.0000 | |
| 111 | Q | B | -1.2025 | |
| 112 | V | B | 0.0000 | |
| 113 | Y | B | 0.0000 | |
| 114 | T | B | -0.4745 | |
| 115 | L | B | 0.0000 | |
| 116 | P | B | -0.2543 | |
| 117 | P | B | -0.4860 | |
| 118 | S | B | 0.0000 | |
| 119 | W | B | 0.0882 | |
| 120 | D | B | -1.1531 | |
| 121 | E | B | 0.0000 | |
| 122 | R | B | -2.3326 | |
| 123 | T | B | -1.8233 | |
| 124 | K | B | -2.7963 | |
| 125 | E | B | -3.4425 | |
| 126 | E | B | -3.3108 | |
| 127 | V | B | 0.0000 | |
| 128 | S | B | 0.0000 | |
| 129 | L | B | 0.0000 | |
| 130 | T | B | 0.0000 | |
| 131 | C | B | 0.0000 | |
| 132 | L | B | 0.0000 | |
| 133 | V | B | 0.0000 | |
| 134 | K | B | -0.4795 | |
| 135 | G | B | -0.9576 | |
| 136 | F | B | 0.0000 | |
| 137 | Y | B | -0.9829 | |
| 138 | P | B | 0.0000 | |
| 139 | S | B | -0.1035 | |
| 140 | D | B | -0.9890 | |
| 141 | I | B | -0.5572 | |
| 142 | A | B | -0.5911 | |
| 143 | V | B | 0.0000 | |
| 144 | E | B | -1.3877 | |
| 145 | W | B | 0.0000 | |
| 146 | E | B | -2.1480 | |
| 147 | S | B | -1.5319 | |
| 148 | N | B | -1.9884 | |
| 149 | G | B | -1.8496 | |
| 150 | Q | B | -2.4210 | |
| 151 | P | B | -2.1529 | |
| 152 | E | B | -2.1918 | |
| 153 | N | B | -2.2293 | |
| 154 | N | B | -1.5260 | |
| 155 | Y | B | -1.0131 | |
| 156 | K | B | -0.6237 | |
| 157 | T | B | -0.1884 | |
| 158 | T | B | 0.0000 | |
| 159 | P | B | -0.1073 | |
| 160 | P | B | 0.1919 | |
| 161 | V | B | 0.6189 | |
| 162 | L | B | 0.9146 | |
| 163 | D | B | -0.3780 | |
| 164 | S | B | -1.0829 | |
| 165 | D | B | -1.8575 | |
| 166 | G | B | -0.8182 | |
| 167 | S | B | 0.0000 | |
| 168 | F | B | 0.2248 | |
| 169 | F | B | 0.0000 | |
| 170 | L | B | 0.0000 | |
| 171 | Y | B | 0.0000 | |
| 172 | S | B | 0.0000 | |
| 173 | K | B | 0.0000 | |
| 174 | L | B | 0.0000 | |
| 175 | T | B | -1.1184 | |
| 176 | V | B | 0.0000 | |
| 177 | E | B | -3.1099 | |
| 178 | A | B | 0.0000 | |
| 179 | S | B | -1.9925 | |
| 180 | E | B | -2.1283 | |
| 181 | W | B | 0.0000 | |
| 182 | W | B | -1.1579 | |
| 183 | Q | B | -1.5272 | |
| 184 | G | B | -1.1121 | |
| 185 | E | B | -1.1075 | |
| 186 | W | B | -0.3202 | |
| 187 | F | B | 0.0000 | |
| 188 | S | B | -1.2291 | |
| 189 | C | B | 0.0000 | |
| 190 | S | B | 0.0000 | |
| 191 | V | B | 0.0000 | |
| 192 | M | B | 0.0000 | |
| 193 | H | B | 0.0000 | |
| 194 | E | B | -1.0462 | |
| 195 | A | B | -1.4726 | |
| 196 | L | B | -1.3839 | |
| 197 | H | B | -1.7415 | |
| 198 | N | B | -1.4395 | |
| 199 | H | B | -0.9129 | |
| 200 | Y | B | -0.5278 | |
| 201 | T | B | -0.9391 | |
| 202 | Q | B | -1.6021 | |
| 203 | K | B | -1.2641 | |
| 204 | S | B | -0.7165 | |
| 205 | L | B | 0.0000 | |
| 206 | R | B | -0.9243 | |
| 207 | R | B | -1.0797 | |
| 208 | S | B | -0.9829 | |
| 209 | P | B | -1.2361 | |
| 210 | G | B | -1.5405 | |
| 211 | K | B | -2.0161 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine