| Chain sequence(s) |
A: TTVHQRTSEKRSCPGGSSRRYPSGASCDVSGGACACYVSNCRGVLCPTLNEIVAYTYEWHVDAW
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:08)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:08)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:08)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:08)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:09)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:51)
[INFO] Main: Simulation completed successfully. (00:00:52)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | T | A | 0.3283 | |
| 2 | T | A | -0.0532 | |
| 3 | V | A | 0.3434 | |
| 4 | H | A | -1.4733 | |
| 5 | Q | A | -2.0188 | |
| 6 | R | A | -2.6855 | |
| 7 | T | A | -1.1047 | |
| 8 | S | A | -1.1835 | |
| 9 | E | A | -1.5457 | |
| 10 | K | A | -2.3756 | |
| 11 | R | A | -2.2253 | |
| 12 | S | A | -1.2485 | |
| 13 | C | A | -0.6819 | |
| 14 | P | A | -0.5396 | |
| 15 | G | A | -0.6473 | |
| 16 | G | A | -0.8110 | |
| 17 | S | A | -1.0867 | |
| 18 | S | A | -1.4078 | |
| 19 | R | A | -2.5901 | |
| 20 | R | A | -1.9476 | |
| 21 | Y | A | -0.6683 | |
| 22 | P | A | 0.0408 | |
| 23 | S | A | -0.3571 | |
| 24 | G | A | -0.8766 | |
| 25 | A | A | -0.8189 | |
| 26 | S | A | -1.1808 | |
| 27 | C | A | 0.0000 | |
| 28 | D | A | -1.4260 | |
| 29 | V | A | 0.6377 | |
| 30 | S | A | -0.1802 | |
| 31 | G | A | -0.4343 | |
| 32 | G | A | -0.4689 | |
| 33 | A | A | -0.1665 | |
| 34 | C | A | -0.6540 | |
| 35 | A | A | -0.8974 | |
| 36 | C | A | 0.0000 | |
| 37 | Y | A | -0.7064 | |
| 38 | V | A | -0.7618 | |
| 39 | S | A | -1.4172 | |
| 40 | N | A | -1.5985 | |
| 41 | C | A | -0.8006 | |
| 42 | R | A | -1.5224 | |
| 43 | G | A | 0.2522 | |
| 44 | V | A | 2.0071 | |
| 45 | L | A | 2.0167 | |
| 46 | C | A | 0.0000 | |
| 47 | P | A | 0.3968 | |
| 48 | T | A | -0.0199 | |
| 49 | L | A | -0.3060 | |
| 50 | N | A | -0.7300 | |
| 51 | E | A | -0.7966 | |
| 52 | I | A | 0.9948 | |
| 53 | V | A | 0.3628 | |
| 54 | A | A | 0.2491 | |
| 55 | Y | A | 0.7130 | |
| 56 | T | A | -0.1337 | |
| 57 | Y | A | 0.0700 | |
| 58 | E | A | -1.7033 | |
| 59 | W | A | -0.6931 | |
| 60 | H | A | -1.0281 | |
| 61 | V | A | -0.1235 | |
| 62 | D | A | -1.2039 | |
| 63 | A | A | -0.0937 | |
| 64 | W | A | 1.0173 |