| Chain sequence(s) |
A: MHSFCAFKADDGPCRAAHPRWFFNIFTRQCEEFSYGGCGGNQNRFESLEECKKMCTRD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:27)
[INFO] Main: Simulation completed successfully. (00:01:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.0502 | |
| 2 | H | A | -0.4933 | |
| 3 | S | A | 0.1039 | |
| 4 | F | A | 0.3872 | |
| 5 | C | A | 0.0000 | |
| 6 | A | A | 0.5476 | |
| 7 | F | A | 0.2215 | |
| 8 | K | A | -1.5294 | |
| 9 | A | A | -1.8973 | |
| 10 | D | A | -2.2555 | |
| 11 | D | A | -2.7203 | |
| 12 | G | A | -1.7232 | |
| 13 | P | A | -1.1728 | |
| 14 | C | A | -1.1532 | |
| 15 | R | A | -2.0870 | |
| 16 | A | A | -1.2243 | |
| 17 | A | A | -0.9668 | |
| 18 | H | A | -1.5160 | |
| 19 | P | A | -1.4148 | |
| 20 | R | A | -1.8584 | |
| 21 | W | A | -1.9219 | |
| 22 | F | A | -1.2912 | |
| 23 | F | A | 0.0000 | |
| 24 | N | A | -0.4578 | |
| 25 | I | A | 0.8479 | |
| 26 | F | A | 1.5959 | |
| 27 | T | A | -0.1893 | |
| 28 | R | A | -1.5312 | |
| 29 | Q | A | -2.0284 | |
| 30 | C | A | -1.9268 | |
| 31 | E | A | -1.7807 | |
| 32 | E | A | -2.3934 | |
| 33 | F | A | -1.4507 | |
| 34 | S | A | -1.5536 | |
| 35 | Y | A | 0.0000 | |
| 36 | G | A | 0.0000 | |
| 37 | G | A | -1.1539 | |
| 38 | C | A | -0.8878 | |
| 39 | G | A | -1.1853 | |
| 40 | G | A | -1.9061 | |
| 41 | N | A | -1.4851 | |
| 42 | Q | A | -1.5409 | |
| 43 | N | A | 0.0000 | |
| 44 | R | A | -1.9094 | |
| 45 | F | A | 0.0000 | |
| 46 | E | A | -2.5792 | |
| 47 | S | A | -2.2112 | |
| 48 | L | A | -2.0603 | |
| 49 | E | A | -3.0398 | |
| 50 | E | A | -2.7443 | |
| 51 | C | A | 0.0000 | |
| 52 | K | A | -3.3459 | |
| 53 | K | A | -3.2650 | |
| 54 | M | A | -1.5393 | |
| 55 | C | A | 0.0000 | |
| 56 | T | A | -2.7155 | |
| 57 | R | A | -2.9749 | |
| 58 | D | A | -2.9712 |