| Chain sequence(s) |
A: QGGSKLLAVVAQEGSSNRAK
B: LVFFAEDVGSNKGAIIGLMVGGVVIA input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:12)
[INFO] Main: Simulation completed successfully. (00:00:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | A | -1.5217 | |
| 2 | G | A | -1.4522 | |
| 3 | G | A | -1.6200 | |
| 4 | S | A | -0.4634 | |
| 5 | K | A | 0.3179 | |
| 6 | L | A | 2.1444 | |
| 7 | L | A | 1.4537 | |
| 8 | A | A | 1.8264 | |
| 9 | V | A | 2.1438 | |
| 10 | V | A | 3.0175 | |
| 11 | A | A | 3.0930 | |
| 12 | Q | A | 2.5272 | |
| 13 | E | A | 2.3013 | |
| 14 | G | A | 1.1278 | |
| 15 | S | A | 0.3878 | |
| 16 | S | A | -1.0521 | |
| 17 | N | A | -2.3014 | |
| 18 | R | A | -2.8293 | |
| 19 | A | A | -1.9323 | |
| 20 | K | A | -2.0490 | |
| 17 | L | B | 3.0619 | |
| 18 | V | B | 3.7791 | |
| 19 | F | B | 4.4600 | |
| 20 | F | B | 3.3297 | |
| 21 | A | B | 1.2485 | |
| 22 | E | B | -1.1713 | |
| 23 | D | B | -0.8139 | |
| 24 | V | B | 0.6763 | |
| 25 | G | B | -0.1418 | |
| 26 | S | B | -0.8085 | |
| 27 | N | B | -1.8185 | |
| 28 | K | B | -1.5962 | |
| 29 | G | B | -0.0806 | |
| 30 | A | B | 0.5178 | |
| 31 | I | B | 2.2915 | |
| 32 | I | B | 2.0408 | |
| 33 | G | B | 1.6646 | |
| 34 | L | B | 2.1907 | |
| 35 | M | B | 2.8018 | |
| 36 | V | B | 3.0596 | |
| 37 | G | B | 1.9802 | |
| 38 | G | B | 2.2714 | |
| 39 | V | B | 2.9667 | |
| 40 | V | B | 3.4309 | |
| 41 | I | B | 2.8524 | |
| 42 | A | B | 1.2052 |