| Chain sequence(s) |
A: GPGAANPAPALRPTSDFVTPTDLLYIAETDLITETGHPTKDIVVDGKVVLPRVSAWDYKVFKLTLPDPNTLPLPTPDAVDPATHIRIWRLLAFKIHVFGPLGVGTYGHPNFNKLGDVENPTEPQHEGADDTQNYSWTPVLKQEYIIGDRPPTGKYTAPAAPAPGLPPGAQPPTTTVTTTIEHGDVADIGFGARDYAALEPSKDNVPDIIRDTVTKVFDYAGMAAEPDGRRMFTSNSYSSSSSSKNLRRSGPELNPRPSEGPPSEEYEPPPPESPYAVPPSTDYFTIPDRGAITESQLLFNKPVFLERAAGLNDGILWHNQLYVTVLDNSRATIETIKTRISTPEINVYDPSNYVTSKRYTREYRLSLILQLCTIPLTPETLEELRRLDPSILVDAKLPEIPPVERPDPLAGKKFIEIDLTDKLSSKLEEFPLGRLYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.7285 | |
| 2 | P | A | -0.6823 | |
| 3 | G | A | -0.8671 | |
| 4 | A | A | -0.6713 | |
| 5 | A | A | -0.7433 | |
| 6 | N | A | -1.4433 | |
| 7 | P | A | -0.8817 | |
| 8 | A | A | -0.5463 | |
| 9 | P | A | -0.5721 | |
| 10 | A | A | -0.2999 | |
| 11 | L | A | -0.2463 | |
| 12 | R | A | -1.0547 | |
| 13 | P | A | -0.9127 | |
| 14 | T | A | 0.0000 | |
| 15 | S | A | -1.4334 | |
| 16 | D | A | -2.0479 | |
| 17 | F | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.5322 | |
| 20 | P | A | -0.6843 | |
| 21 | T | A | -0.8338 | |
| 22 | D | A | -1.6160 | |
| 23 | L | A | -0.4810 | |
| 24 | L | A | -0.2868 | |
| 25 | Y | A | -0.2442 | |
| 26 | I | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -0.8276 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.5060 | |
| 31 | L | A | -0.0673 | |
| 32 | I | A | -0.0651 | |
| 33 | T | A | -0.2679 | |
| 34 | E | A | -0.4750 | |
| 35 | T | A | -0.4412 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -1.3921 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.5618 | |
| 40 | K | A | -2.0766 | |
| 41 | D | A | -0.8534 | |
| 42 | I | A | 1.2542 | |
| 43 | V | A | 2.1694 | |
| 44 | V | A | 1.6196 | |
| 45 | D | A | -0.9559 | |
| 46 | G | A | -0.5446 | |
| 47 | K | A | -0.2146 | |
| 48 | V | A | 1.9053 | |
| 49 | V | A | 2.5880 | |
| 50 | L | A | 1.2040 | |
| 51 | P | A | -0.1109 | |
| 52 | R | A | -1.1874 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | D | A | 0.0000 | |
| 58 | Y | A | 0.0000 | |
| 59 | K | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | K | A | -1.2597 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.2203 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -0.6565 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -0.9102 | |
| 70 | T | A | -0.3176 | |
| 71 | L | A | -0.0428 | |
| 72 | P | A | -0.1211 | |
| 73 | L | A | -0.1045 | |
| 74 | P | A | -0.4011 | |
| 75 | T | A | -0.7633 | |
| 76 | P | A | -1.0685 | |
| 77 | D | A | -1.9741 | |
| 78 | A | A | -1.1350 | |
| 79 | V | A | -0.7811 | |
| 80 | D | A | -1.5759 | |
| 81 | P | A | -0.9212 | |
| 82 | A | A | -0.5359 | |
| 83 | T | A | -0.5171 | |
| 84 | H | A | -0.6583 | |
| 85 | I | A | 0.0000 | |
| 86 | R | A | -0.4860 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | -0.3762 | |
| 90 | L | A | 0.0000 | |
| 91 | L | A | -0.3754 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | K | A | -0.8180 | |
| 95 | I | A | 0.0000 | |
| 96 | H | A | -0.6419 | |
| 97 | V | A | 0.0000 | |
| 98 | F | A | 0.1671 | |
| 99 | G | A | -0.3152 | |
| 100 | P | A | -0.0210 | |
| 101 | L | A | 0.3062 | |
| 102 | G | A | 0.6971 | |
| 103 | V | A | 1.3487 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | 0.1936 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.7820 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | -1.7510 | |
| 110 | N | A | -2.6337 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | K | A | -1.0002 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.6516 | |
| 117 | V | A | -1.4968 | |
| 118 | E | A | -2.8537 | |
| 119 | N | A | -2.6733 | |
| 120 | P | A | -1.9896 | |
| 121 | T | A | -1.6593 | |
| 122 | E | A | -2.3585 | |
| 123 | P | A | -1.0174 | |
| 124 | Q | A | -1.2052 | |
| 125 | H | A | -1.4190 | |
| 126 | E | A | -1.7006 | |
| 127 | G | A | -1.7432 | |
| 128 | A | A | -1.2642 | |
| 129 | D | A | -2.4650 | |
| 130 | D | A | -2.0065 | |
| 131 | T | A | -1.9748 | |
| 132 | Q | A | -2.1626 | |
| 133 | N | A | -2.1165 | |
| 134 | Y | A | -1.1107 | |
| 135 | S | A | -0.6296 | |
| 136 | W | A | 0.0000 | |
| 137 | T | A | -0.0463 | |
| 138 | P | A | 0.0000 | |
| 139 | V | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | K | A | -0.2902 | |
| 142 | Q | A | 0.0000 | |
| 143 | E | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | R | A | -0.6535 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | -0.2922 | |
| 153 | G | A | 0.0000 | |
| 154 | K | A | -0.4986 | |
| 155 | Y | A | -0.2698 | |
| 156 | T | A | -0.2881 | |
| 157 | A | A | 0.0000 | |
| 158 | P | A | -0.3742 | |
| 159 | A | A | -0.1306 | |
| 160 | A | A | -0.1569 | |
| 161 | P | A | -0.3989 | |
| 162 | A | A | -0.1547 | |
| 163 | P | A | -0.3359 | |
| 164 | G | A | -0.3283 | |
| 165 | L | A | -0.0172 | |
| 166 | P | A | -0.4169 | |
| 167 | P | A | -0.6224 | |
| 168 | G | A | -0.6592 | |
| 169 | A | A | -0.5489 | |
| 170 | Q | A | -1.1250 | |
| 171 | P | A | -0.7611 | |
| 172 | P | A | -0.4763 | |
| 173 | T | A | -0.3759 | |
| 174 | T | A | -0.0813 | |
| 175 | T | A | -0.1248 | |
| 176 | V | A | 0.0465 | |
| 177 | T | A | -0.1804 | |
| 178 | T | A | -0.1876 | |
| 179 | T | A | -0.6316 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.1736 | |
| 182 | H | A | -1.2066 | |
| 183 | G | A | -0.7352 | |
| 184 | D | A | -0.5898 | |
| 185 | V | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | -0.1784 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.3730 | |
| 190 | F | A | -0.0074 | |
| 191 | G | A | -0.2859 | |
| 192 | A | A | -0.3137 | |
| 193 | R | A | -0.4682 | |
| 194 | D | A | -0.5167 | |
| 195 | Y | A | 0.0000 | |
| 196 | A | A | -0.9912 | |
| 197 | A | A | -0.5030 | |
| 198 | L | A | -0.6894 | |
| 199 | E | A | -1.1978 | |
| 200 | P | A | -1.1349 | |
| 201 | S | A | -1.2015 | |
| 202 | K | A | -2.3148 | |
| 203 | D | A | -1.8055 | |
| 204 | N | A | -1.1482 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -1.7154 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | R | A | -1.8054 | |
| 211 | D | A | -1.8608 | |
| 212 | T | A | -0.8080 | |
| 213 | V | A | -0.2464 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | V | A | 0.0771 | |
| 217 | F | A | 0.0000 | |
| 218 | D | A | -0.1315 | |
| 219 | Y | A | 0.3051 | |
| 220 | A | A | 0.1190 | |
| 221 | G | A | -0.2520 | |
| 222 | M | A | 0.0000 | |
| 223 | A | A | -0.1063 | |
| 224 | A | A | -0.2072 | |
| 225 | E | A | -0.6063 | |
| 226 | P | A | -0.4730 | |
| 227 | D | A | -0.4398 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.5597 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.4733 | |
| 234 | S | A | -0.3903 | |
| 235 | N | A | -0.7229 | |
| 236 | S | A | -0.4286 | |
| 237 | Y | A | -0.0797 | |
| 238 | S | A | -0.2937 | |
| 239 | S | A | -0.4263 | |
| 240 | S | A | -0.7013 | |
| 241 | S | A | -0.7847 | |
| 242 | S | A | -0.9563 | |
| 243 | S | A | -1.2250 | |
| 244 | K | A | -1.9901 | |
| 245 | N | A | -1.4884 | |
| 246 | L | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | 0.0000 | |
| 249 | S | A | -1.0794 | |
| 250 | G | A | -0.8269 | |
| 251 | P | A | -0.6789 | |
| 252 | E | A | -0.6311 | |
| 253 | L | A | 0.2917 | |
| 254 | N | A | -1.1963 | |
| 255 | P | A | -1.2033 | |
| 256 | R | A | 0.0000 | |
| 257 | P | A | -1.6725 | |
| 258 | S | A | -1.0593 | |
| 259 | E | A | -2.0081 | |
| 260 | G | A | -1.5846 | |
| 261 | P | A | -1.3875 | |
| 262 | P | A | -2.0724 | |
| 263 | S | A | -2.2921 | |
| 264 | E | A | -3.0803 | |
| 265 | E | A | -3.0233 | |
| 266 | Y | A | -2.1596 | |
| 267 | E | A | -2.6376 | |
| 268 | P | A | -1.2035 | |
| 269 | P | A | -0.5026 | |
| 270 | P | A | -1.0559 | |
| 271 | P | A | -0.8826 | |
| 272 | E | A | -1.7106 | |
| 273 | S | A | -0.5257 | |
| 274 | P | A | -0.2197 | |
| 275 | Y | A | 1.1221 | |
| 276 | A | A | 0.5526 | |
| 277 | V | A | 1.2773 | |
| 278 | P | A | 0.4167 | |
| 279 | P | A | -0.0751 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | -0.5347 | |
| 282 | D | A | -0.8425 | |
| 283 | Y | A | 0.6896 | |
| 284 | F | A | 0.2543 | |
| 285 | T | A | -0.3929 | |
| 286 | I | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -0.9509 | |
| 289 | R | A | 0.0000 | |
| 290 | G | A | -0.4325 | |
| 291 | A | A | 0.0854 | |
| 292 | I | A | -0.0337 | |
| 293 | T | A | -0.8842 | |
| 294 | E | A | -1.8714 | |
| 295 | S | A | -1.2070 | |
| 296 | Q | A | -0.9240 | |
| 297 | L | A | -0.7488 | |
| 298 | L | A | -0.6189 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.2551 | |
| 301 | K | A | -1.6863 | |
| 302 | P | A | -0.6144 | |
| 303 | V | A | -0.1235 | |
| 304 | F | A | -0.3700 | |
| 305 | L | A | 0.0000 | |
| 306 | E | A | -2.5643 | |
| 307 | R | A | -2.6951 | |
| 308 | A | A | 0.0000 | |
| 309 | A | A | -0.3852 | |
| 310 | G | A | -0.4110 | |
| 311 | L | A | -0.4023 | |
| 312 | N | A | 0.0000 | |
| 313 | D | A | -1.0564 | |
| 314 | G | A | 0.0000 | |
| 315 | I | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.5200 | |
| 319 | N | A | -0.5829 | |
| 320 | Q | A | -0.7044 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | S | A | 0.0000 | |
| 330 | R | A | 0.2434 | |
| 331 | A | A | 0.0000 | |
| 332 | T | A | 0.0020 | |
| 333 | I | A | -0.6747 | |
| 334 | E | A | -2.0130 | |
| 335 | T | A | -1.3482 | |
| 336 | I | A | -0.4981 | |
| 337 | K | A | -1.3540 | |
| 338 | T | A | -0.5820 | |
| 339 | R | A | -0.9895 | |
| 340 | I | A | 1.1092 | |
| 341 | S | A | -0.1223 | |
| 342 | T | A | -0.6793 | |
| 343 | P | A | -1.2964 | |
| 344 | E | A | -1.9189 | |
| 345 | I | A | -0.7715 | |
| 346 | N | A | -0.5642 | |
| 347 | V | A | 1.3977 | |
| 348 | Y | A | 1.4274 | |
| 349 | D | A | -0.1528 | |
| 350 | P | A | -0.4770 | |
| 351 | S | A | -0.1858 | |
| 352 | N | A | -0.0912 | |
| 353 | Y | A | 0.1601 | |
| 354 | V | A | 1.0915 | |
| 355 | T | A | -0.0359 | |
| 356 | S | A | -0.7802 | |
| 357 | K | A | -1.8881 | |
| 358 | R | A | -1.4334 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.5915 | |
| 361 | R | A | 0.0000 | |
| 362 | E | A | -0.3607 | |
| 363 | Y | A | 0.0000 | |
| 364 | R | A | -0.8681 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | L | A | 0.0000 | |
| 370 | Q | A | -0.3476 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | T | A | 0.0000 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.4337 | |
| 376 | L | A | -0.3744 | |
| 377 | T | A | -0.9115 | |
| 378 | P | A | -1.5294 | |
| 379 | E | A | -2.4629 | |
| 380 | T | A | 0.0000 | |
| 381 | L | A | -1.7554 | |
| 382 | E | A | -3.0417 | |
| 383 | E | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | R | A | -2.3898 | |
| 386 | R | A | -1.8545 | |
| 387 | L | A | -1.1275 | |
| 388 | D | A | -0.9202 | |
| 389 | P | A | -1.2869 | |
| 390 | S | A | -0.6758 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -0.8891 | |
| 394 | D | A | -0.9982 | |
| 395 | A | A | -1.1227 | |
| 396 | K | A | -2.0755 | |
| 397 | L | A | -1.3073 | |
| 398 | P | A | -1.4045 | |
| 399 | E | A | -2.0312 | |
| 400 | I | A | -0.8181 | |
| 401 | P | A | -0.5807 | |
| 402 | P | A | -0.5169 | |
| 403 | V | A | 0.4636 | |
| 404 | E | A | -1.6958 | |
| 405 | R | A | -1.9283 | |
| 406 | P | A | -1.5899 | |
| 407 | D | A | -1.9616 | |
| 408 | P | A | -1.0852 | |
| 409 | L | A | -0.9613 | |
| 410 | A | A | -1.0820 | |
| 411 | G | A | -1.3581 | |
| 412 | K | A | -1.9655 | |
| 413 | K | A | -2.4775 | |
| 414 | F | A | -1.4212 | |
| 415 | I | A | -1.1188 | |
| 416 | E | A | -2.2653 | |
| 417 | I | A | -1.7463 | |
| 418 | D | A | -2.5527 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.5770 | |
| 421 | D | A | -2.2888 | |
| 422 | K | A | -1.8204 | |
| 423 | L | A | -0.7689 | |
| 424 | S | A | -1.0709 | |
| 425 | S | A | -1.2577 | |
| 426 | K | A | -2.9225 | |
| 427 | L | A | 0.0000 | |
| 428 | E | A | -3.5661 | |
| 429 | E | A | -3.4656 | |
| 430 | F | A | -1.9191 | |
| 431 | P | A | -1.2113 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -2.6367 | |
| 435 | L | A | -0.6363 | |
| 436 | Y | A | -0.3235 | |
| 437 | L | A | -0.2712 | |
| 438 | N | A | -1.7697 | |
| 439 | R | A | -1.8972 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine