Project name: query_structure

Status: done

Started: 2026-03-17 00:13:26
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Chain sequence(s) A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFYIEYWEPTSDGEAIALNVPGSERSYDLTGLKPGTEYFVEIWGVKGGPRSPPLSAWFTTGG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:52)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:53)
Show buried residues

Minimal score value
-3.1274
Maximal score value
1.2325
Average score
-0.8911
Total score value
-81.9813

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.8078
2 L A -0.0010
3 P A -0.3332
4 A A -0.6108
5 P A 0.0000
6 K A -1.7928
7 N A -1.3961
8 L A -0.1402
9 V A 1.1576
10 V A 0.5482
11 S A -0.5945
12 R A -2.0070
13 V A -1.0674
14 T A -1.8573
15 E A -3.1274
16 D A -2.7333
17 S A -2.0389
18 A A 0.0000
19 R A -1.1602
20 L A 0.0000
21 S A -0.3229
22 W A 0.0000
23 T A -1.2102
24 A A -1.3536
25 P A -1.3656
26 D A -2.2672
27 A A -1.4762
28 A A -1.2516
29 F A 0.0000
30 D A -2.5864
31 S A -1.9080
32 F A 0.0000
33 Y A -0.5924
34 I A 0.0000
35 E A -0.0769
36 Y A 0.0000
37 W A -0.5753
38 E A -1.3026
39 P A -0.8383
40 T A -0.8585
41 S A -1.6577
42 D A -2.4957
43 G A -2.0464
44 E A -2.1444
45 A A -0.7308
46 I A 0.4179
47 A A 0.0050
48 L A -0.1894
49 N A -1.1823
50 V A 0.0000
51 P A -1.3638
52 G A 0.0000
53 S A -1.5905
54 E A -1.4849
55 R A -1.1204
56 S A -0.5941
57 Y A -0.6914
58 D A -1.6146
59 L A 0.0000
60 T A -1.3952
61 G A -1.4726
62 L A 0.0000
63 K A -2.9930
64 P A -2.6364
65 G A -2.0147
66 T A -1.9193
67 E A -1.2539
68 Y A 0.0000
69 F A 0.3863
70 V A 0.0000
71 E A -0.0519
72 I A 0.0000
73 W A -0.6656
74 G A 0.0000
75 V A -1.8960
76 K A -2.4763
77 G A -1.8841
78 G A -1.7434
79 P A -1.4785
80 R A -1.9256
81 S A 0.0000
82 P A -0.4024
83 P A -0.6086
84 L A -0.4143
85 S A 0.0682
86 A A 0.8393
87 W A 1.2325
88 F A 0.0000
89 T A -0.8883
90 T A 0.0000
91 G A -1.8269
92 G A -1.7449
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Laboratory of Theory of Biopolymers 2018