| Chain sequence(s) |
A: MLPAPKNLVVSRVTEDSARLSWTAPDAAFDSFYIEYWEPTSDGEAIALNVPGSERSYDLTGLKPGTEYFVEIWGVKGGPRSPPLSAWFTTGG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:52)
[INFO] Main: Simulation completed successfully. (00:00:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.8078 | |
| 2 | L | A | -0.0010 | |
| 3 | P | A | -0.3332 | |
| 4 | A | A | -0.6108 | |
| 5 | P | A | 0.0000 | |
| 6 | K | A | -1.7928 | |
| 7 | N | A | -1.3961 | |
| 8 | L | A | -0.1402 | |
| 9 | V | A | 1.1576 | |
| 10 | V | A | 0.5482 | |
| 11 | S | A | -0.5945 | |
| 12 | R | A | -2.0070 | |
| 13 | V | A | -1.0674 | |
| 14 | T | A | -1.8573 | |
| 15 | E | A | -3.1274 | |
| 16 | D | A | -2.7333 | |
| 17 | S | A | -2.0389 | |
| 18 | A | A | 0.0000 | |
| 19 | R | A | -1.1602 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.3229 | |
| 22 | W | A | 0.0000 | |
| 23 | T | A | -1.2102 | |
| 24 | A | A | -1.3536 | |
| 25 | P | A | -1.3656 | |
| 26 | D | A | -2.2672 | |
| 27 | A | A | -1.4762 | |
| 28 | A | A | -1.2516 | |
| 29 | F | A | 0.0000 | |
| 30 | D | A | -2.5864 | |
| 31 | S | A | -1.9080 | |
| 32 | F | A | 0.0000 | |
| 33 | Y | A | -0.5924 | |
| 34 | I | A | 0.0000 | |
| 35 | E | A | -0.0769 | |
| 36 | Y | A | 0.0000 | |
| 37 | W | A | -0.5753 | |
| 38 | E | A | -1.3026 | |
| 39 | P | A | -0.8383 | |
| 40 | T | A | -0.8585 | |
| 41 | S | A | -1.6577 | |
| 42 | D | A | -2.4957 | |
| 43 | G | A | -2.0464 | |
| 44 | E | A | -2.1444 | |
| 45 | A | A | -0.7308 | |
| 46 | I | A | 0.4179 | |
| 47 | A | A | 0.0050 | |
| 48 | L | A | -0.1894 | |
| 49 | N | A | -1.1823 | |
| 50 | V | A | 0.0000 | |
| 51 | P | A | -1.3638 | |
| 52 | G | A | 0.0000 | |
| 53 | S | A | -1.5905 | |
| 54 | E | A | -1.4849 | |
| 55 | R | A | -1.1204 | |
| 56 | S | A | -0.5941 | |
| 57 | Y | A | -0.6914 | |
| 58 | D | A | -1.6146 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.3952 | |
| 61 | G | A | -1.4726 | |
| 62 | L | A | 0.0000 | |
| 63 | K | A | -2.9930 | |
| 64 | P | A | -2.6364 | |
| 65 | G | A | -2.0147 | |
| 66 | T | A | -1.9193 | |
| 67 | E | A | -1.2539 | |
| 68 | Y | A | 0.0000 | |
| 69 | F | A | 0.3863 | |
| 70 | V | A | 0.0000 | |
| 71 | E | A | -0.0519 | |
| 72 | I | A | 0.0000 | |
| 73 | W | A | -0.6656 | |
| 74 | G | A | 0.0000 | |
| 75 | V | A | -1.8960 | |
| 76 | K | A | -2.4763 | |
| 77 | G | A | -1.8841 | |
| 78 | G | A | -1.7434 | |
| 79 | P | A | -1.4785 | |
| 80 | R | A | -1.9256 | |
| 81 | S | A | 0.0000 | |
| 82 | P | A | -0.4024 | |
| 83 | P | A | -0.6086 | |
| 84 | L | A | -0.4143 | |
| 85 | S | A | 0.0682 | |
| 86 | A | A | 0.8393 | |
| 87 | W | A | 1.2325 | |
| 88 | F | A | 0.0000 | |
| 89 | T | A | -0.8883 | |
| 90 | T | A | 0.0000 | |
| 91 | G | A | -1.8269 | |
| 92 | G | A | -1.7449 |