| Chain sequence(s) |
A: FEFEFEGKGH
C: FEFEFEGKGH B: FEFEFEGKGH D: FEFEFEGKGH input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:36)
[INFO] Main: Simulation completed successfully. (00:01:37)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | -0.2914 | |
| 2 | E | A | -2.4499 | |
| 3 | F | A | -3.3803 | |
| 4 | E | A | -3.6753 | |
| 5 | F | A | -4.3332 | |
| 6 | E | A | -3.3525 | |
| 7 | G | A | -3.2480 | |
| 8 | K | A | -2.4332 | |
| 9 | G | A | -1.1816 | |
| 10 | H | A | -0.6605 | |
| 1 | F | B | 0.5556 | |
| 2 | E | B | -1.7068 | |
| 3 | F | B | -1.8352 | |
| 4 | E | B | -3.8837 | |
| 5 | F | B | 0.0000 | |
| 6 | E | B | -4.4746 | |
| 7 | G | B | -4.3014 | |
| 8 | K | B | -3.5752 | |
| 9 | G | B | -1.7871 | |
| 10 | H | B | -1.2418 | |
| 1 | F | C | 0.1214 | |
| 2 | E | C | -2.1898 | |
| 3 | F | C | -2.7399 | |
| 4 | E | C | -3.4882 | |
| 5 | F | C | -4.0722 | |
| 6 | E | C | -3.8310 | |
| 7 | G | C | -3.6248 | |
| 8 | K | C | -3.0260 | |
| 9 | G | C | -1.7391 | |
| 10 | H | C | -1.3063 | |
| 1 | F | D | 0.3808 | |
| 2 | E | D | -1.5714 | |
| 3 | F | D | -1.6629 | |
| 4 | E | D | -3.1158 | |
| 5 | F | D | 0.0000 | |
| 6 | E | D | -3.8066 | |
| 7 | G | D | -4.2486 | |
| 8 | K | D | -3.4592 | |
| 9 | G | D | -2.2543 | |
| 10 | H | D | -0.8790 |