Chain sequence(s) |
A: AIITVTPKSFGSPGSLGKLLCEVTPVSGQERFVWSSLDTPSQRSFSGPWLEAQEAQLLSQPWQCQLYQGERLLGAAVYFTEL
H: QVQLVESGGGVVQPGRSLRLSCVASGFTFSSYGMHWVRQAPGKGLEWVAIIWYDGSNKYYADSVKGRFTISRDNSKNTQYLQMNSLRAEDTAVYYCASVATSGDFDYYGMDVWGQGTTVTVSS L: EIVLTQSPATLSLSPGERTTLSCRASQRISTYLAWYQQKPGQAPRLLIYDASKRATGIPARFSGSGSGTGFTLTISSLEPEDFAVYYCQQRSNWPLTFGGGTKVEIK input PDB |
Selected Chain(s) | A,H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:12) [INFO] Main: Simulation completed successfully. (00:03:14) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | A | A | 1.0771 | |
2 | I | A | 2.0287 | |
3 | I | A | 1.1231 | |
4 | T | A | 0.5573 | |
5 | V | A | 0.0830 | |
6 | T | A | -0.4337 | |
7 | P | A | -0.5298 | |
8 | K | A | -0.9442 | |
9 | S | A | -0.1023 | |
10 | F | A | 0.9605 | |
11 | G | A | 0.0695 | |
12 | S | A | -0.3148 | |
13 | P | A | -0.4996 | |
14 | G | A | -0.4511 | |
15 | S | A | 0.1838 | |
16 | L | A | 1.1579 | |
17 | G | A | -0.1703 | |
18 | K | A | -0.7514 | |
19 | L | A | 0.0000 | |
20 | L | A | -0.3976 | |
21 | C | A | 0.0000 | |
22 | E | A | -0.4181 | |
23 | V | A | 0.0000 | |
24 | T | A | 0.7970 | |
25 | P | A | 0.8284 | |
26 | V | A | 0.9471 | |
27 | S | A | -0.1104 | |
28 | G | A | -0.8380 | |
29 | Q | A | -2.0441 | |
30 | E | A | -1.4138 | |
31 | R | A | -1.5263 | |
32 | F | A | -0.3693 | |
33 | V | A | 0.0072 | |
34 | W | A | 0.0000 | |
35 | S | A | 0.0000 | |
36 | S | A | 0.0000 | |
37 | L | A | -0.2035 | |
38 | D | A | -1.6348 | |
39 | T | A | -0.9713 | |
40 | P | A | -0.4303 | |
41 | S | A | 0.0000 | |
42 | Q | A | 0.0000 | |
43 | R | A | 0.3050 | |
44 | S | A | 0.0000 | |
45 | F | A | 0.1614 | |
46 | S | A | -0.1383 | |
47 | G | A | -0.2492 | |
48 | P | A | -0.3578 | |
49 | W | A | -0.1301 | |
50 | L | A | 0.0000 | |
51 | E | A | -1.1405 | |
52 | A | A | -1.0700 | |
53 | Q | A | -1.2019 | |
54 | E | A | -1.7321 | |
55 | A | A | -0.6800 | |
56 | Q | A | 0.0000 | |
57 | L | A | 0.2140 | |
58 | L | A | 0.8467 | |
59 | S | A | 0.0000 | |
60 | Q | A | -0.0086 | |
61 | P | A | 0.4985 | |
62 | W | A | 0.0000 | |
63 | Q | A | 0.3624 | |
64 | C | A | 0.0000 | |
65 | Q | A | 0.1195 | |
66 | L | A | 0.0000 | |
67 | Y | A | -0.7872 | |
68 | Q | A | -1.6225 | |
69 | G | A | -2.1178 | |
70 | E | A | -2.7066 | |
71 | R | A | -2.2576 | |
72 | L | A | 0.1692 | |
73 | L | A | 0.1859 | |
74 | G | A | 0.3260 | |
75 | A | A | 0.4934 | |
76 | A | A | 0.3310 | |
77 | V | A | 1.0913 | |
78 | Y | A | 1.4873 | |
79 | F | A | 2.1013 | |
80 | T | A | 0.6593 | |
81 | E | A | -0.2371 | |
82 | L | A | 1.1600 | |
83 | Q | H | -1.3797 | |
84 | V | H | -0.9394 | |
85 | Q | H | -0.9896 | |
86 | L | H | 0.0000 | |
87 | V | H | 0.5839 | |
88 | E | H | 0.0000 | |
89 | S | H | -0.3718 | |
90 | G | H | -0.8274 | |
91 | G | H | -0.3508 | |
92 | G | H | 0.3002 | |
93 | V | H | 1.2265 | |
94 | V | H | 0.0000 | |
95 | Q | H | -1.6924 | |
96 | P | H | -1.8715 | |
97 | G | H | -2.1416 | |
98 | R | H | -2.8084 | |
99 | S | H | -2.1398 | |
100 | L | H | -2.0028 | |
101 | R | H | -2.2498 | |
102 | L | H | 0.0000 | |
103 | S | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | V | H | 0.5358 | |
106 | A | H | 0.0000 | |
107 | S | H | -0.4136 | |
108 | G | H | -0.8544 | |
109 | F | H | -0.0691 | |
110 | T | H | 0.2673 | |
111 | F | H | 0.3054 | |
112 | S | H | -0.4097 | |
113 | S | H | -0.0988 | |
114 | Y | H | 0.2458 | |
115 | G | H | 0.0000 | |
116 | M | H | 0.0000 | |
117 | H | H | 0.0000 | |
118 | W | H | 0.0000 | |
119 | V | H | 0.0000 | |
120 | R | H | 0.0000 | |
121 | Q | H | 0.0000 | |
122 | A | H | -0.9375 | |
123 | P | H | -0.8983 | |
124 | G | H | -1.0660 | |
125 | K | H | -1.5068 | |
126 | G | H | -0.7797 | |
127 | L | H | 0.0000 | |
128 | E | H | -0.5288 | |
129 | W | H | 0.0000 | |
130 | V | H | 0.0000 | |
131 | A | H | 0.0000 | |
132 | I | H | 0.0000 | |
133 | I | H | 0.0000 | |
134 | W | H | 0.0000 | |
135 | Y | H | -0.6532 | |
136 | D | H | -1.9201 | |
137 | G | H | -1.3728 | |
138 | S | H | -0.3771 | |
139 | N | H | 0.0000 | |
140 | K | H | -0.7877 | |
141 | Y | H | -0.4994 | |
142 | Y | H | -0.9593 | |
143 | A | H | -1.1973 | |
144 | D | H | -2.5131 | |
145 | S | H | -2.0203 | |
146 | V | H | 0.0000 | |
147 | K | H | -2.6076 | |
148 | G | H | -1.9982 | |
149 | R | H | -2.1225 | |
150 | F | H | 0.0000 | |
151 | T | H | -1.1408 | |
152 | I | H | 0.0000 | |
153 | S | H | -0.5280 | |
154 | R | H | -1.1588 | |
155 | D | H | -1.7341 | |
156 | N | H | -1.6351 | |
157 | S | H | -1.4560 | |
158 | K | H | -2.1817 | |
159 | N | H | -1.2942 | |
160 | T | H | -0.6177 | |
161 | Q | H | 0.0000 | |
162 | Y | H | -0.2751 | |
163 | L | H | 0.0000 | |
164 | Q | H | -1.6324 | |
165 | M | H | 0.0000 | |
166 | N | H | -2.4103 | |
167 | S | H | -2.1016 | |
168 | L | H | 0.0000 | |
169 | R | H | -3.0161 | |
170 | A | H | -1.9297 | |
171 | E | H | -2.7026 | |
172 | D | H | 0.0000 | |
173 | T | H | -0.6801 | |
174 | A | H | 0.0000 | |
175 | V | H | -0.1174 | |
176 | Y | H | 0.0000 | |
177 | Y | H | 0.0000 | |
178 | C | H | 0.0000 | |
179 | A | H | 0.0000 | |
180 | S | H | 0.0000 | |
181 | V | H | 0.0000 | |
182 | A | H | 0.0000 | |
183 | T | H | -0.1988 | |
184 | S | H | -0.4726 | |
185 | G | H | -0.9494 | |
186 | D | H | -1.0910 | |
187 | F | H | 0.8329 | |
188 | D | H | 0.0533 | |
189 | Y | H | -0.1831 | |
190 | Y | H | 0.0000 | |
191 | G | H | 0.0000 | |
192 | M | H | 0.0000 | |
193 | D | H | -1.5968 | |
194 | V | H | -1.0048 | |
195 | W | H | 0.0000 | |
196 | G | H | 0.0000 | |
197 | Q | H | -1.3128 | |
198 | G | H | -0.6769 | |
199 | T | H | -0.2920 | |
200 | T | H | 0.1812 | |
201 | V | H | 0.0000 | |
202 | T | H | 0.0054 | |
203 | V | H | 0.0000 | |
204 | S | H | -0.4443 | |
205 | S | H | -0.3753 | |
206 | E | L | -2.1101 | |
207 | I | L | 0.0000 | |
208 | V | L | -0.6569 | |
209 | L | L | -0.5712 | |
210 | T | L | -0.7011 | |
211 | Q | L | -1.2676 | |
212 | S | L | -0.8887 | |
213 | P | L | -0.7249 | |
214 | A | L | -0.3524 | |
215 | T | L | -0.3081 | |
216 | L | L | 0.0695 | |
217 | S | L | -0.4634 | |
218 | L | L | -0.7766 | |
219 | S | L | -1.3507 | |
220 | P | L | -1.6730 | |
221 | G | L | -1.3971 | |
222 | E | L | -1.9854 | |
223 | R | L | -2.5486 | |
224 | T | L | -1.1504 | |
225 | T | L | -0.5836 | |
226 | L | L | 0.0000 | |
227 | S | L | -0.7034 | |
228 | C | L | -1.0111 | |
229 | R | L | -2.3800 | |
230 | A | L | -1.8437 | |
231 | S | L | -1.5448 | |
232 | Q | L | -2.2573 | |
233 | R | L | -2.7697 | |
234 | I | L | 0.0000 | |
235 | S | L | -0.7276 | |
236 | T | L | -0.4413 | |
237 | Y | L | 0.0000 | |
238 | L | L | 0.0000 | |
239 | A | L | 0.0000 | |
240 | W | L | 0.0000 | |
241 | Y | L | 0.0000 | |
242 | Q | L | 0.0000 | |
243 | Q | L | 0.0000 | |
244 | K | L | -1.3624 | |
245 | P | L | -0.8671 | |
246 | G | L | -1.3419 | |
247 | Q | L | -2.0302 | |
248 | A | L | -1.5209 | |
249 | P | L | 0.0000 | |
250 | R | L | -2.3347 | |
251 | L | L | 0.0000 | |
252 | L | L | 0.0000 | |
253 | I | L | 0.0000 | |
254 | Y | L | -1.4014 | |
255 | D | L | -1.8595 | |
256 | A | L | 0.0000 | |
257 | S | L | -1.7580 | |
258 | K | L | -2.5497 | |
259 | R | L | -2.0568 | |
260 | A | L | 0.0000 | |
261 | T | L | -0.9980 | |
262 | G | L | -0.5428 | |
263 | I | L | -0.7043 | |
264 | P | L | -0.3479 | |
265 | A | L | -0.3532 | |
266 | R | L | -0.8356 | |
267 | F | L | 0.0000 | |
268 | S | L | -0.9523 | |
269 | G | L | -1.0662 | |
270 | S | L | -0.9755 | |
271 | G | L | -1.0331 | |
272 | S | L | -1.2133 | |
273 | G | L | -1.5472 | |
274 | T | L | -1.8288 | |
275 | G | L | -1.4829 | |
276 | F | L | 0.0000 | |
277 | T | L | -0.6532 | |
278 | L | L | 0.0000 | |
279 | T | L | -0.6596 | |
280 | I | L | 0.0000 | |
281 | S | L | -1.4047 | |
282 | S | L | -1.7202 | |
283 | L | L | 0.0000 | |
284 | E | L | -2.0235 | |
285 | P | L | -1.7364 | |
286 | E | L | -2.0407 | |
287 | D | L | 0.0000 | |
288 | F | L | -0.6242 | |
289 | A | L | 0.0000 | |
290 | V | L | -0.1855 | |
291 | Y | L | 0.0000 | |
292 | Y | L | 0.0000 | |
293 | C | L | -0.2615 | |
294 | Q | L | 0.0000 | |
295 | Q | L | -0.4127 | |
296 | R | L | 0.0000 | |
297 | S | L | -0.0071 | |
298 | N | L | 0.0000 | |
299 | W | L | 0.6535 | |
300 | P | L | 0.4194 | |
301 | L | L | 0.4574 | |
302 | T | L | 0.0429 | |
303 | F | L | 0.0000 | |
304 | G | L | -0.0989 | |
305 | G | L | -0.4399 | |
306 | G | L | -0.4037 | |
307 | T | L | -0.3460 | |
308 | K | L | -0.5388 | |
309 | V | L | 0.0000 | |
310 | E | L | -0.9419 | |
311 | I | L | -1.3213 | |
312 | K | L | -1.7282 |