| Chain sequence(s) |
L: KWQLIQEAGWGNYFYD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:23)
[INFO] Main: Simulation completed successfully. (00:00:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 178 | K | L | -1.5246 | |
| 179 | W | L | 0.4537 | |
| 180 | Q | L | -0.7432 | |
| 181 | L | L | 1.1761 | |
| 182 | I | L | 0.4003 | |
| 183 | Q | L | -1.4456 | |
| 184 | E | L | -1.8561 | |
| 185 | A | L | -0.3123 | |
| 186 | G | L | 0.0179 | |
| 187 | W | L | 1.0880 | |
| 188 | G | L | -0.4848 | |
| 189 | N | L | -1.2612 | |
| 190 | Y | L | 0.6551 | |
| 191 | F | L | 2.2777 | |
| 192 | Y | L | 1.3461 | |
| 193 | D | L | -1.5526 |