| Chain sequence(s) |
A: APSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPSSIEKTISKAKGQPREPQVYTLPPSREEMTKNQVSLSCAVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLVSKLTVDKSRWQQGNVFSCSVMHEALHNRFTQKSLSLS
B: APSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKCKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPSSIEKTISKAKGQPREPQVYTLPPSREEMTKNQVSLWCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSL input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:08:49)
[INFO] Main: Simulation completed successfully. (00:08:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 132 | A | B | -0.2872 | |
| 133 | P | B | 0.0000 | |
| 134 | S | B | 0.0717 | |
| 135 | V | B | 0.0000 | |
| 136 | F | B | 1.1291 | |
| 137 | L | B | 0.0000 | |
| 138 | F | B | 1.0321 | |
| 139 | P | B | -0.1789 | |
| 140 | P | B | -1.1167 | |
| 141 | K | B | -2.0192 | |
| 142 | P | B | -1.2728 | |
| 143 | K | B | -0.8479 | |
| 144 | D | B | 0.0000 | |
| 145 | T | B | 0.0000 | |
| 146 | L | B | 0.0000 | |
| 147 | M | B | 0.5183 | |
| 148 | I | B | 1.6301 | |
| 149 | S | B | 0.3338 | |
| 150 | R | B | -0.5671 | |
| 151 | T | B | -0.5050 | |
| 152 | P | B | 0.0000 | |
| 153 | E | B | -1.1139 | |
| 154 | V | B | 0.0000 | |
| 155 | T | B | 0.1969 | |
| 156 | C | B | 0.0000 | |
| 157 | V | B | 0.0000 | |
| 158 | V | B | 0.0000 | |
| 159 | V | B | -0.7195 | |
| 160 | D | B | -1.8581 | |
| 161 | V | B | 0.0000 | |
| 162 | S | B | -1.9457 | |
| 163 | H | B | -2.1664 | |
| 164 | E | B | -2.6955 | |
| 165 | D | B | -2.2675 | |
| 166 | P | B | -1.8331 | |
| 167 | E | B | -1.9809 | |
| 168 | V | B | -1.3378 | |
| 169 | K | B | -1.9452 | |
| 170 | F | B | -1.0457 | |
| 171 | N | B | -1.6056 | |
| 172 | W | B | 0.0000 | |
| 173 | Y | B | -1.0609 | |
| 174 | V | B | -1.0881 | |
| 175 | D | B | -2.2302 | |
| 176 | G | B | -1.0728 | |
| 177 | V | B | 0.1874 | |
| 178 | E | B | -1.5290 | |
| 179 | V | B | -0.9574 | |
| 180 | H | B | -2.0822 | |
| 181 | N | B | -2.1912 | |
| 182 | A | B | -1.7896 | |
| 183 | K | B | -2.1822 | |
| 184 | C | B | -1.2687 | |
| 185 | K | B | -1.9973 | |
| 186 | P | B | -2.0956 | |
| 187 | R | B | -2.9352 | |
| 188 | E | B | -3.6313 | |
| 189 | E | B | -3.5672 | |
| 190 | Q | B | -2.2548 | |
| 191 | Y | B | -0.3437 | |
| 192 | N | B | -1.4155 | |
| 193 | S | B | -1.3805 | |
| 194 | T | B | -1.9737 | |
| 195 | Y | B | -2.5288 | |
| 196 | R | B | -2.4433 | |
| 197 | V | B | 0.0000 | |
| 198 | V | B | -0.6794 | |
| 199 | S | B | 0.0000 | |
| 200 | V | B | 0.0000 | |
| 201 | L | B | 0.0000 | |
| 202 | T | B | -0.7080 | |
| 203 | V | B | 0.0000 | |
| 204 | L | B | 0.8456 | |
| 205 | H | B | 0.0000 | |
| 206 | Q | B | -1.1507 | |
| 207 | D | B | -1.4831 | |
| 208 | W | B | 0.0000 | |
| 209 | L | B | -1.1793 | |
| 210 | N | B | -2.2260 | |
| 211 | G | B | -2.1553 | |
| 212 | K | B | -2.3599 | |
| 213 | E | B | -2.1933 | |
| 214 | Y | B | 0.0000 | |
| 215 | K | B | -1.8673 | |
| 216 | C | B | 0.0000 | |
| 217 | K | B | -1.7270 | |
| 218 | V | B | 0.0000 | |
| 219 | S | B | -1.3931 | |
| 220 | N | B | 0.0000 | |
| 221 | K | B | -2.4512 | |
| 222 | A | B | -1.3731 | |
| 223 | L | B | 0.0000 | |
| 224 | P | B | -0.6678 | |
| 225 | S | B | -0.7147 | |
| 226 | S | B | -1.0712 | |
| 227 | I | B | -0.7528 | |
| 228 | E | B | -2.1991 | |
| 229 | K | B | -1.3799 | |
| 230 | T | B | -1.0979 | |
| 231 | I | B | -0.2509 | |
| 232 | S | B | -1.0923 | |
| 233 | K | B | 0.0000 | |
| 234 | A | B | -1.1159 | |
| 235 | K | B | -2.2942 | |
| 236 | G | B | -2.0341 | |
| 237 | Q | B | -2.0422 | |
| 238 | P | B | -1.9499 | |
| 239 | R | B | -2.4080 | |
| 240 | E | B | -2.6212 | |
| 241 | P | B | 0.0000 | |
| 242 | Q | B | -1.1381 | |
| 243 | V | B | -0.7273 | |
| 244 | Y | B | 0.0000 | |
| 245 | T | B | -0.6006 | |
| 246 | L | B | 0.0000 | |
| 247 | P | B | -0.2049 | |
| 248 | P | B | -0.6549 | |
| 249 | S | B | -1.4217 | |
| 250 | R | B | -2.7008 | |
| 251 | E | B | -2.5610 | |
| 252 | E | B | 0.0000 | |
| 253 | M | B | -2.3392 | |
| 254 | T | B | -2.0539 | |
| 255 | K | B | -3.2484 | |
| 256 | N | B | -3.0461 | |
| 257 | Q | B | -2.6851 | |
| 258 | V | B | 0.0000 | |
| 259 | S | B | 0.0000 | |
| 260 | L | B | 0.0000 | |
| 261 | W | B | 0.0000 | |
| 262 | C | B | 0.0000 | |
| 263 | L | B | 0.0000 | |
| 264 | V | B | 0.0000 | |
| 265 | K | B | -0.4731 | |
| 266 | G | B | -0.9934 | |
| 267 | F | B | 0.0000 | |
| 268 | Y | B | -1.2233 | |
| 269 | P | B | 0.0000 | |
| 270 | S | B | -0.2229 | |
| 271 | D | B | -1.1120 | |
| 272 | I | B | -0.6787 | |
| 273 | A | B | -0.4928 | |
| 274 | V | B | 0.0000 | |
| 275 | E | B | -0.8983 | |
| 276 | W | B | 0.0000 | |
| 277 | E | B | -1.5234 | |
| 278 | S | B | 0.0000 | |
| 279 | N | B | -1.7595 | |
| 280 | G | B | -1.8205 | |
| 281 | Q | B | -2.2356 | |
| 282 | P | B | -1.8979 | |
| 283 | E | B | -1.8312 | |
| 284 | N | B | -2.1662 | |
| 285 | N | B | -1.7913 | |
| 286 | Y | B | -0.9556 | |
| 287 | K | B | -0.7597 | |
| 288 | T | B | -0.3299 | |
| 289 | T | B | 0.0000 | |
| 290 | P | B | -0.0679 | |
| 291 | P | B | 0.1983 | |
| 292 | V | B | 0.7074 | |
| 293 | L | B | 0.8763 | |
| 294 | D | B | -0.6986 | |
| 295 | S | B | -1.2628 | |
| 296 | D | B | -1.9254 | |
| 297 | G | B | -0.8847 | |
| 298 | S | B | 0.0000 | |
| 299 | F | B | 0.1772 | |
| 300 | F | B | 0.0000 | |
| 301 | L | B | 0.0000 | |
| 302 | Y | B | 0.0000 | |
| 303 | S | B | 0.0000 | |
| 304 | K | B | 0.0000 | |
| 305 | L | B | 0.0000 | |
| 306 | T | B | -1.0894 | |
| 307 | V | B | 0.0000 | |
| 308 | D | B | -2.8824 | |
| 309 | K | B | -2.8527 | |
| 310 | S | B | -2.1880 | |
| 311 | R | B | -1.9021 | |
| 312 | W | B | 0.0000 | |
| 313 | Q | B | -1.7762 | |
| 314 | Q | B | -1.7156 | |
| 315 | G | B | -0.5579 | |
| 316 | N | B | -0.3117 | |
| 317 | V | B | 0.8728 | |
| 318 | F | B | 0.0000 | |
| 319 | S | B | 0.0000 | |
| 320 | C | B | 0.0000 | |
| 321 | S | B | 0.0000 | |
| 322 | V | B | 0.0000 | |
| 323 | M | B | 0.0000 | |
| 324 | H | B | 0.0000 | |
| 325 | E | B | -1.1375 | |
| 326 | A | B | -1.6048 | |
| 327 | L | B | -1.4868 | |
| 328 | H | B | -1.7581 | |
| 329 | N | B | -1.6532 | |
| 330 | H | B | -0.9162 | |
| 331 | Y | B | -0.3963 | |
| 332 | T | B | -0.5997 | |
| 333 | Q | B | -0.8993 | |
| 334 | K | B | -1.0015 | |
| 335 | S | B | -0.3937 | |
| 336 | L | B | 0.0000 | |
| 337 | S | B | 0.6139 | |
| 338 | L | B | 1.0840 | |
| 17 | A | A | -0.2440 | |
| 18 | P | A | 0.0000 | |
| 19 | S | A | -0.0306 | |
| 20 | V | A | 0.0000 | |
| 21 | F | A | 0.8776 | |
| 22 | L | A | 0.0000 | |
| 23 | F | A | 1.0263 | |
| 24 | P | A | -0.1955 | |
| 25 | P | A | -1.1389 | |
| 26 | K | A | -2.0523 | |
| 27 | P | A | -1.3350 | |
| 28 | K | A | -0.9222 | |
| 29 | D | A | 0.0000 | |
| 30 | T | A | 0.0000 | |
| 31 | L | A | 0.0000 | |
| 32 | M | A | 0.6166 | |
| 33 | I | A | 1.5719 | |
| 34 | S | A | 0.3442 | |
| 35 | R | A | -0.5975 | |
| 36 | T | A | -0.4927 | |
| 37 | P | A | 0.0000 | |
| 38 | E | A | -1.0531 | |
| 39 | V | A | 0.0000 | |
| 40 | T | A | 0.0847 | |
| 41 | C | A | 0.0000 | |
| 42 | V | A | 0.0000 | |
| 43 | V | A | 0.0000 | |
| 44 | V | A | -0.9366 | |
| 45 | D | A | -1.7373 | |
| 46 | V | A | 0.0000 | |
| 47 | S | A | -2.0836 | |
| 48 | H | A | -2.2818 | |
| 49 | E | A | -2.7908 | |
| 50 | D | A | -2.4596 | |
| 51 | P | A | -2.5786 | |
| 52 | E | A | -3.0270 | |
| 53 | V | A | -2.0221 | |
| 54 | K | A | -2.2317 | |
| 55 | F | A | -1.3673 | |
| 56 | N | A | -1.0534 | |
| 57 | W | A | 0.0000 | |
| 58 | Y | A | -0.4168 | |
| 59 | V | A | -0.6653 | |
| 60 | D | A | -1.7537 | |
| 61 | G | A | -0.6422 | |
| 62 | V | A | 0.8346 | |
| 63 | E | A | -0.2905 | |
| 64 | V | A | -0.4139 | |
| 65 | H | A | -1.7914 | |
| 66 | N | A | -2.1431 | |
| 67 | A | A | -1.8824 | |
| 68 | K | A | -2.4032 | |
| 69 | T | A | -1.8455 | |
| 70 | K | A | -2.1653 | |
| 71 | P | A | -2.2313 | |
| 72 | R | A | -3.3220 | |
| 73 | E | A | -3.6477 | |
| 74 | E | A | -3.4947 | |
| 75 | Q | A | -2.0383 | |
| 76 | Y | A | -0.1749 | |
| 77 | N | A | -1.3206 | |
| 78 | S | A | -1.3374 | |
| 79 | T | A | -2.1038 | |
| 80 | Y | A | -2.6543 | |
| 81 | R | A | -2.4775 | |
| 82 | V | A | 0.0000 | |
| 83 | V | A | 0.0000 | |
| 84 | S | A | 0.0000 | |
| 85 | V | A | 0.0000 | |
| 86 | L | A | 0.0000 | |
| 87 | T | A | -0.6363 | |
| 88 | V | A | 0.0000 | |
| 89 | L | A | 1.1595 | |
| 90 | H | A | 0.1782 | |
| 91 | Q | A | -0.7417 | |
| 92 | D | A | -1.2269 | |
| 93 | W | A | 0.0000 | |
| 94 | L | A | -0.9245 | |
| 95 | N | A | -2.1484 | |
| 96 | G | A | -2.0338 | |
| 97 | K | A | -2.2376 | |
| 98 | E | A | -2.1108 | |
| 99 | Y | A | 0.0000 | |
| 100 | K | A | -1.5716 | |
| 101 | C | A | 0.0000 | |
| 102 | K | A | -1.6028 | |
| 103 | V | A | 0.0000 | |
| 104 | S | A | -1.5418 | |
| 105 | N | A | -1.7964 | |
| 106 | K | A | -2.6209 | |
| 107 | A | A | -1.4240 | |
| 108 | L | A | -0.5790 | |
| 109 | P | A | -0.5749 | |
| 110 | S | A | -0.6840 | |
| 111 | S | A | -0.9559 | |
| 112 | I | A | -0.7563 | |
| 113 | E | A | -2.2033 | |
| 114 | K | A | -1.4335 | |
| 115 | T | A | -1.1710 | |
| 116 | I | A | -0.2795 | |
| 117 | S | A | -1.1427 | |
| 118 | K | A | -1.3482 | |
| 119 | A | A | -1.2372 | |
| 120 | K | A | -2.3380 | |
| 121 | G | A | -1.9626 | |
| 122 | Q | A | -1.9379 | |
| 123 | P | A | -1.6657 | |
| 124 | R | A | -1.9748 | |
| 125 | E | A | -2.3916 | |
| 126 | P | A | 0.0000 | |
| 127 | Q | A | -1.6975 | |
| 128 | V | A | 0.0000 | |
| 129 | Y | A | -0.8747 | |
| 130 | T | A | 0.0000 | |
| 131 | L | A | 0.0000 | |
| 132 | P | A | -0.3670 | |
| 133 | P | A | 0.0000 | |
| 134 | S | A | -1.5389 | |
| 135 | R | A | -2.7177 | |
| 136 | E | A | -2.8690 | |
| 137 | E | A | 0.0000 | |
| 138 | M | A | -2.3351 | |
| 139 | T | A | -1.8219 | |
| 140 | K | A | -2.5383 | |
| 141 | N | A | -2.8742 | |
| 142 | Q | A | -2.7989 | |
| 143 | V | A | 0.0000 | |
| 144 | S | A | 0.0000 | |
| 145 | L | A | 0.0000 | |
| 146 | S | A | 0.0000 | |
| 147 | C | A | 0.0000 | |
| 148 | A | A | 0.0000 | |
| 149 | V | A | 0.0000 | |
| 150 | K | A | -0.7206 | |
| 151 | G | A | -1.1353 | |
| 152 | F | A | 0.0000 | |
| 153 | Y | A | -1.0401 | |
| 154 | P | A | 0.0000 | |
| 155 | S | A | -0.3312 | |
| 156 | D | A | -1.3344 | |
| 157 | I | A | -0.7413 | |
| 158 | A | A | 0.0000 | |
| 159 | V | A | 0.0000 | |
| 160 | E | A | -1.0756 | |
| 161 | W | A | 0.0000 | |
| 162 | E | A | -1.6118 | |
| 163 | S | A | 0.0000 | |
| 164 | N | A | -1.7863 | |
| 165 | G | A | -1.8305 | |
| 166 | Q | A | -2.2601 | |
| 167 | P | A | -2.0215 | |
| 168 | E | A | -1.9878 | |
| 169 | N | A | -2.4129 | |
| 170 | N | A | -2.1178 | |
| 171 | Y | A | -1.3957 | |
| 172 | K | A | -1.0345 | |
| 173 | T | A | -0.4098 | |
| 174 | T | A | 0.0000 | |
| 175 | P | A | -0.1011 | |
| 176 | P | A | 0.0829 | |
| 177 | V | A | 0.5641 | |
| 178 | L | A | 0.7067 | |
| 179 | D | A | -0.6206 | |
| 180 | S | A | -1.2262 | |
| 181 | D | A | -1.9498 | |
| 182 | G | A | -1.0116 | |
| 183 | S | A | 0.0000 | |
| 184 | F | A | 0.0667 | |
| 185 | F | A | 0.0000 | |
| 186 | L | A | 0.0000 | |
| 187 | V | A | 0.0000 | |
| 188 | S | A | 0.0000 | |
| 189 | K | A | 0.0000 | |
| 190 | L | A | 0.0000 | |
| 191 | T | A | -1.2743 | |
| 192 | V | A | 0.0000 | |
| 193 | D | A | -3.1105 | |
| 194 | K | A | -3.1166 | |
| 195 | S | A | -2.4302 | |
| 196 | R | A | -2.2185 | |
| 197 | W | A | 0.0000 | |
| 198 | Q | A | -2.4483 | |
| 199 | Q | A | -2.1060 | |
| 200 | G | A | -1.0725 | |
| 201 | N | A | -0.6260 | |
| 202 | V | A | 0.6345 | |
| 203 | F | A | 0.0000 | |
| 204 | S | A | 0.0000 | |
| 205 | C | A | 0.0000 | |
| 206 | S | A | 0.0000 | |
| 207 | V | A | 0.0000 | |
| 208 | M | A | 0.0000 | |
| 209 | H | A | 0.0000 | |
| 210 | E | A | -1.0519 | |
| 211 | A | A | -1.3965 | |
| 212 | L | A | -1.5125 | |
| 213 | H | A | -1.7940 | |
| 214 | N | A | -1.5296 | |
| 215 | R | A | -1.0599 | |
| 216 | F | A | -0.3527 | |
| 217 | T | A | -0.7256 | |
| 218 | Q | A | -0.9162 | |
| 219 | K | A | -0.8385 | |
| 220 | S | A | -0.3002 | |
| 221 | L | A | 0.0000 | |
| 222 | S | A | 0.0050 | |
| 223 | L | A | -0.2010 | |
| 224 | S | A | -0.2197 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine