Project name: query_structure

Status: done

Started: 2026-03-17 01:18:31
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Chain sequence(s) A: VSSVPTKLEVVAATPTSLLISWDAEYFYVSYYRITYGETGGNSPVQEFTVPGSYSTATISGLSPGVDYTITVYAYDQYYSSYGSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:33)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:33)
Show buried residues

Minimal score value
-2.7754
Maximal score value
2.5791
Average score
-0.2461
Total score value
-22.6452

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 V A 1.5311
2 S A 0.3326
3 S A 0.4683
4 V A -0.3622
5 P A 0.0000
6 T A -1.9973
7 K A -2.6233
8 L A 0.0000
9 E A -1.9279
10 V A 0.1043
11 V A 1.5373
12 A A 0.9025
13 A A 0.3125
14 T A -0.3749
15 P A -0.8078
16 T A -0.5340
17 S A -0.3118
18 L A 0.0000
19 L A 0.7632
20 I A 0.0000
21 S A -0.6293
22 W A 0.0000
23 D A -2.7754
24 A A -1.0647
25 E A -1.1361
26 Y A 1.3039
27 F A 2.5791
28 Y A 2.1689
29 V A 1.3619
30 S A 0.7745
31 Y A 0.3131
32 Y A 0.0000
33 R A -0.5235
34 I A 0.0000
35 T A -0.5062
36 Y A 0.0000
37 G A 0.0000
38 E A -1.4363
39 T A -1.4406
40 G A -1.3146
41 G A -1.3867
42 N A -1.4901
43 S A -0.7572
44 P A -0.2338
45 V A 0.5620
46 Q A -0.6256
47 E A -1.5443
48 F A -0.6093
49 T A -0.2455
50 V A 0.3165
51 P A 0.1372
52 G A 0.7024
53 S A 0.7660
54 Y A 0.9354
55 S A 0.0329
56 T A 0.1585
57 A A 0.0000
58 T A 0.3176
59 I A 0.0000
60 S A -0.4720
61 G A -0.6884
62 L A 0.0000
63 S A -0.9312
64 P A -1.0992
65 G A -1.2625
66 V A -1.2946
67 D A -2.5923
68 Y A 0.0000
69 T A -0.9540
70 I A 0.0000
71 T A -0.3522
72 V A 0.0000
73 Y A 0.1180
74 A A 0.0000
75 Y A 0.6691
76 D A 0.0000
77 Q A 0.0328
78 Y A 1.2908
79 Y A 1.5577
80 S A 0.6765
81 S A 0.2440
82 Y A 0.4406
83 G A -0.3801
84 S A -0.3143
85 P A -0.0966
86 I A 0.0005
87 S A -0.5395
88 I A -0.7313
89 N A -1.8965
90 Y A -1.6610
91 R A -2.6479
92 T A -1.4849
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Laboratory of Theory of Biopolymers 2018