| Chain sequence(s) |
A: EVQLVESGGGLVQPGGSLRLSCAASGYSFTSYWWVRQAPGKGLEWVSIYPGNGDSRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARLTGRYFDYWGWGQGTLVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:12)
[INFO] Main: Simulation completed successfully. (00:01:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | A | -1.8206 | |
| 2 | V | A | -0.5785 | |
| 3 | Q | A | -0.8808 | |
| 4 | L | A | 0.0000 | |
| 5 | V | A | 1.1278 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.1935 | |
| 8 | G | A | -0.6367 | |
| 9 | G | A | 0.1362 | |
| 10 | G | A | 0.6766 | |
| 11 | L | A | 1.3387 | |
| 12 | V | A | 0.0000 | |
| 13 | Q | A | -1.3871 | |
| 14 | P | A | -1.6438 | |
| 15 | G | A | -1.3955 | |
| 16 | G | A | -0.9558 | |
| 17 | S | A | -1.3334 | |
| 18 | L | A | -1.1273 | |
| 19 | R | A | -2.2451 | |
| 20 | L | A | 0.0000 | |
| 21 | S | A | -0.5871 | |
| 22 | C | A | 0.0000 | |
| 23 | A | A | -0.1599 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -0.6560 | |
| 26 | G | A | -0.3802 | |
| 27 | Y | A | 1.1692 | |
| 28 | S | A | 0.9819 | |
| 29 | F | A | 1.9458 | |
| 30 | T | A | 0.7253 | |
| 31 | S | A | 0.7988 | |
| 32 | Y | A | 0.0000 | |
| 33 | W | A | 0.8717 | |
| 34 | W | A | 0.0000 | |
| 35 | V | A | 0.0000 | |
| 36 | R | A | -0.3276 | |
| 37 | Q | A | -0.7638 | |
| 38 | A | A | -1.2395 | |
| 39 | P | A | -1.2452 | |
| 40 | G | A | -1.4647 | |
| 41 | K | A | -2.2912 | |
| 42 | G | A | -1.2126 | |
| 43 | L | A | -0.0437 | |
| 44 | E | A | -0.8443 | |
| 45 | W | A | 0.4236 | |
| 46 | V | A | 0.0000 | |
| 47 | S | A | 0.0000 | |
| 48 | I | A | 1.2151 | |
| 49 | Y | A | 0.9771 | |
| 50 | P | A | -0.3289 | |
| 51 | G | A | -0.9646 | |
| 52 | N | A | -1.3099 | |
| 53 | G | A | -1.2094 | |
| 54 | D | A | -1.5790 | |
| 55 | S | A | -1.2458 | |
| 56 | R | A | -1.0747 | |
| 57 | F | A | 0.0000 | |
| 58 | T | A | -1.0351 | |
| 59 | I | A | 0.0000 | |
| 60 | S | A | -1.2745 | |
| 61 | R | A | -2.8330 | |
| 62 | D | A | -2.7358 | |
| 63 | N | A | -2.6791 | |
| 64 | S | A | -2.2085 | |
| 65 | K | A | -2.8652 | |
| 66 | N | A | -2.0922 | |
| 67 | T | A | 0.0000 | |
| 68 | L | A | 0.0000 | |
| 69 | Y | A | -1.1504 | |
| 70 | L | A | 0.0000 | |
| 71 | Q | A | -1.5544 | |
| 72 | M | A | 0.0000 | |
| 73 | N | A | -1.4742 | |
| 74 | S | A | -1.1641 | |
| 75 | L | A | 0.0000 | |
| 76 | R | A | -2.3599 | |
| 77 | A | A | -1.8035 | |
| 78 | E | A | -2.2848 | |
| 79 | D | A | 0.0000 | |
| 80 | T | A | -0.4851 | |
| 81 | A | A | 0.0000 | |
| 82 | V | A | 0.7697 | |
| 83 | Y | A | 0.0000 | |
| 84 | Y | A | 0.5858 | |
| 85 | C | A | 0.0000 | |
| 86 | A | A | 0.0000 | |
| 87 | R | A | 0.0000 | |
| 88 | L | A | 0.6053 | |
| 89 | T | A | 0.6201 | |
| 90 | G | A | -0.5924 | |
| 91 | R | A | -1.2863 | |
| 92 | Y | A | 0.3913 | |
| 93 | F | A | 0.5509 | |
| 94 | D | A | -0.5849 | |
| 95 | Y | A | 0.8466 | |
| 96 | W | A | 0.9138 | |
| 97 | G | A | 0.4791 | |
| 98 | W | A | 0.7188 | |
| 99 | G | A | 0.0466 | |
| 100 | Q | A | -0.6077 | |
| 101 | G | A | 0.0000 | |
| 102 | T | A | 0.6159 | |
| 103 | L | A | 1.5680 | |
| 104 | V | A | 0.0000 | |
| 105 | T | A | 0.3221 | |
| 106 | V | A | 0.0000 | |
| 107 | S | A | -0.5043 | |
| 108 | S | A | -0.8980 |