| Chain sequence(s) |
A: GGCCSHPACAAAAGALGGCCSHPACAAAAGCL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:03)
[INFO] Main: Simulation completed successfully. (00:00:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.7121 | |
| 2 | G | A | -0.5893 | |
| 3 | C | A | -0.1390 | |
| 4 | C | A | 0.2841 | |
| 5 | S | A | -0.5167 | |
| 6 | H | A | -0.9839 | |
| 7 | P | A | -0.5125 | |
| 8 | A | A | -0.2326 | |
| 9 | C | A | -0.0764 | |
| 10 | A | A | -0.1299 | |
| 11 | A | A | 0.0079 | |
| 12 | A | A | 0.0022 | |
| 13 | A | A | 0.1149 | |
| 14 | G | A | -0.2437 | |
| 15 | A | A | 0.1948 | |
| 16 | L | A | 0.5778 | |
| 17 | G | A | -0.1938 | |
| 18 | G | A | -0.0728 | |
| 19 | C | A | 0.3859 | |
| 20 | C | A | 0.5175 | |
| 21 | S | A | -0.0707 | |
| 22 | H | A | -0.2733 | |
| 23 | P | A | -0.2748 | |
| 24 | A | A | -0.0128 | |
| 25 | C | A | 0.1495 | |
| 26 | A | A | 0.0902 | |
| 27 | A | A | 0.2111 | |
| 28 | A | A | 0.4372 | |
| 29 | A | A | 0.5028 | |
| 30 | G | A | 0.4324 | |
| 31 | C | A | 1.3050 | |
| 32 | L | A | 1.7873 |