Project name: query_structure

Status: done

Started: 2026-03-16 23:20:56
Settings
Chain sequence(s) A: GGCCSHPACAAAAGALGGCCSHPACAAAAGCL
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:03)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:03)
Show buried residues

Minimal score value
-0.9839
Maximal score value
1.7873
Average score
0.0614
Total score value
1.9663

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.7121
2 G A -0.5893
3 C A -0.1390
4 C A 0.2841
5 S A -0.5167
6 H A -0.9839
7 P A -0.5125
8 A A -0.2326
9 C A -0.0764
10 A A -0.1299
11 A A 0.0079
12 A A 0.0022
13 A A 0.1149
14 G A -0.2437
15 A A 0.1948
16 L A 0.5778
17 G A -0.1938
18 G A -0.0728
19 C A 0.3859
20 C A 0.5175
21 S A -0.0707
22 H A -0.2733
23 P A -0.2748
24 A A -0.0128
25 C A 0.1495
26 A A 0.0902
27 A A 0.2111
28 A A 0.4372
29 A A 0.5028
30 G A 0.4324
31 C A 1.3050
32 L A 1.7873
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Laboratory of Theory of Biopolymers 2018