| Chain sequence(s) |
A: GSLCGDTCFVLGCNDSSCSCNYPICVKD
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:04)
[INFO] Main: Simulation completed successfully. (00:00:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.1660 | |
| 2 | S | A | -0.2231 | |
| 3 | L | A | 0.9608 | |
| 4 | C | A | -0.1305 | |
| 5 | G | A | -0.1767 | |
| 6 | D | A | 0.2235 | |
| 7 | T | A | 1.4940 | |
| 8 | C | A | 0.0000 | |
| 9 | F | A | 3.4943 | |
| 10 | V | A | 3.5912 | |
| 11 | L | A | 2.7452 | |
| 12 | G | A | 1.2945 | |
| 13 | C | A | -0.1417 | |
| 14 | N | A | -1.7425 | |
| 15 | D | A | -1.9589 | |
| 16 | S | A | -1.2095 | |
| 17 | S | A | -1.2489 | |
| 18 | C | A | 0.0000 | |
| 19 | S | A | -0.5566 | |
| 20 | C | A | 0.4656 | |
| 21 | N | A | 0.1033 | |
| 22 | Y | A | 1.6669 | |
| 23 | P | A | 1.5729 | |
| 24 | I | A | 1.5082 | |
| 25 | C | A | 0.0000 | |
| 26 | V | A | 0.0644 | |
| 27 | K | A | -1.3462 | |
| 28 | D | A | -2.0343 |