Project name: query_structure

Status: done

Started: 2026-03-17 00:11:13
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Chain sequence(s) A: MGVSDVPRDLEVVAATPTSLLISWSQPGRYVKYYRITYGETGGNSPVQEFTVPNDTYTATISGLKPGVDYTITVYAVYGKYGPYYGYDPISINYRTEIDKPSQ
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:07)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:08)
Show buried residues

Minimal score value
-3.1314
Maximal score value
1.553
Average score
-0.6965
Total score value
-71.7356

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 1.2585
2 G A 0.7307
3 V A 1.5389
4 S A 0.0450
5 D A -0.8900
6 V A -0.7518
7 P A 0.0000
8 R A -3.1314
9 D A -3.1215
10 L A 0.0000
11 E A -1.9308
12 V A 0.1141
13 V A 1.5530
14 A A 0.8992
15 A A -0.0266
16 T A -1.0053
17 P A -1.9931
18 T A -1.2568
19 S A -0.6786
20 L A 0.0000
21 L A 0.7822
22 I A 0.0000
23 S A -0.4511
24 W A 0.0000
25 S A -1.4254
26 Q A -1.5534
27 P A -0.7382
28 G A -0.7640
29 R A -1.9829
30 Y A -1.0592
31 V A 0.0000
32 K A -2.3723
33 Y A -1.3062
34 Y A 0.0000
35 R A -0.6925
36 I A 0.0000
37 T A 0.0000
38 Y A -0.3043
39 G A 0.0000
40 E A -1.6399
41 T A -1.3087
42 G A -1.2543
43 G A -1.4655
44 N A -1.5766
45 S A -0.8767
46 P A -0.3168
47 V A 0.4579
48 Q A -0.8145
49 E A -1.6071
50 F A -0.5900
51 T A -0.3209
52 V A -0.4641
53 P A -1.3441
54 N A -2.2094
55 D A -2.2620
56 T A -0.8554
57 Y A 0.0080
58 T A 0.1999
59 A A 0.0000
60 T A 0.0758
61 I A 0.0000
62 S A -0.6309
63 G A -0.9842
64 L A 0.0000
65 K A -2.5142
66 P A -2.1289
67 G A -1.6223
68 V A -1.4262
69 D A -2.2731
70 Y A 0.0000
71 T A -0.7868
72 I A 0.0000
73 T A -0.4219
74 V A 0.0000
75 Y A 0.0258
76 A A 0.0000
77 V A 0.0000
78 Y A -0.5797
79 G A -0.5935
80 K A -0.3051
81 Y A 0.9051
82 G A 0.3382
83 P A 0.4093
84 Y A 1.4830
85 Y A 1.1234
86 G A 0.3360
87 Y A 0.4517
88 D A -0.6482
89 P A -0.5046
90 I A -0.5584
91 S A -0.7170
92 I A -0.7065
93 N A -1.7152
94 Y A -1.6158
95 R A -2.6460
96 T A 0.0000
97 E A -2.5068
98 I A -1.4272
99 D A -2.8014
100 K A -2.8487
101 P A -1.8426
102 S A -1.6651
103 Q A -1.6596
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Laboratory of Theory of Biopolymers 2018