| Chain sequence(s) |
A: MGVSDVPRDLEVVAATPTSLLISWSQPGRYVKYYRITYGETGGNSPVQEFTVPNDTYTATISGLKPGVDYTITVYAVYGKYGPYYGYDPISINYRTEIDKPSQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:07)
[INFO] Main: Simulation completed successfully. (00:01:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.2585 | |
| 2 | G | A | 0.7307 | |
| 3 | V | A | 1.5389 | |
| 4 | S | A | 0.0450 | |
| 5 | D | A | -0.8900 | |
| 6 | V | A | -0.7518 | |
| 7 | P | A | 0.0000 | |
| 8 | R | A | -3.1314 | |
| 9 | D | A | -3.1215 | |
| 10 | L | A | 0.0000 | |
| 11 | E | A | -1.9308 | |
| 12 | V | A | 0.1141 | |
| 13 | V | A | 1.5530 | |
| 14 | A | A | 0.8992 | |
| 15 | A | A | -0.0266 | |
| 16 | T | A | -1.0053 | |
| 17 | P | A | -1.9931 | |
| 18 | T | A | -1.2568 | |
| 19 | S | A | -0.6786 | |
| 20 | L | A | 0.0000 | |
| 21 | L | A | 0.7822 | |
| 22 | I | A | 0.0000 | |
| 23 | S | A | -0.4511 | |
| 24 | W | A | 0.0000 | |
| 25 | S | A | -1.4254 | |
| 26 | Q | A | -1.5534 | |
| 27 | P | A | -0.7382 | |
| 28 | G | A | -0.7640 | |
| 29 | R | A | -1.9829 | |
| 30 | Y | A | -1.0592 | |
| 31 | V | A | 0.0000 | |
| 32 | K | A | -2.3723 | |
| 33 | Y | A | -1.3062 | |
| 34 | Y | A | 0.0000 | |
| 35 | R | A | -0.6925 | |
| 36 | I | A | 0.0000 | |
| 37 | T | A | 0.0000 | |
| 38 | Y | A | -0.3043 | |
| 39 | G | A | 0.0000 | |
| 40 | E | A | -1.6399 | |
| 41 | T | A | -1.3087 | |
| 42 | G | A | -1.2543 | |
| 43 | G | A | -1.4655 | |
| 44 | N | A | -1.5766 | |
| 45 | S | A | -0.8767 | |
| 46 | P | A | -0.3168 | |
| 47 | V | A | 0.4579 | |
| 48 | Q | A | -0.8145 | |
| 49 | E | A | -1.6071 | |
| 50 | F | A | -0.5900 | |
| 51 | T | A | -0.3209 | |
| 52 | V | A | -0.4641 | |
| 53 | P | A | -1.3441 | |
| 54 | N | A | -2.2094 | |
| 55 | D | A | -2.2620 | |
| 56 | T | A | -0.8554 | |
| 57 | Y | A | 0.0080 | |
| 58 | T | A | 0.1999 | |
| 59 | A | A | 0.0000 | |
| 60 | T | A | 0.0758 | |
| 61 | I | A | 0.0000 | |
| 62 | S | A | -0.6309 | |
| 63 | G | A | -0.9842 | |
| 64 | L | A | 0.0000 | |
| 65 | K | A | -2.5142 | |
| 66 | P | A | -2.1289 | |
| 67 | G | A | -1.6223 | |
| 68 | V | A | -1.4262 | |
| 69 | D | A | -2.2731 | |
| 70 | Y | A | 0.0000 | |
| 71 | T | A | -0.7868 | |
| 72 | I | A | 0.0000 | |
| 73 | T | A | -0.4219 | |
| 74 | V | A | 0.0000 | |
| 75 | Y | A | 0.0258 | |
| 76 | A | A | 0.0000 | |
| 77 | V | A | 0.0000 | |
| 78 | Y | A | -0.5797 | |
| 79 | G | A | -0.5935 | |
| 80 | K | A | -0.3051 | |
| 81 | Y | A | 0.9051 | |
| 82 | G | A | 0.3382 | |
| 83 | P | A | 0.4093 | |
| 84 | Y | A | 1.4830 | |
| 85 | Y | A | 1.1234 | |
| 86 | G | A | 0.3360 | |
| 87 | Y | A | 0.4517 | |
| 88 | D | A | -0.6482 | |
| 89 | P | A | -0.5046 | |
| 90 | I | A | -0.5584 | |
| 91 | S | A | -0.7170 | |
| 92 | I | A | -0.7065 | |
| 93 | N | A | -1.7152 | |
| 94 | Y | A | -1.6158 | |
| 95 | R | A | -2.6460 | |
| 96 | T | A | 0.0000 | |
| 97 | E | A | -2.5068 | |
| 98 | I | A | -1.4272 | |
| 99 | D | A | -2.8014 | |
| 100 | K | A | -2.8487 | |
| 101 | P | A | -1.8426 | |
| 102 | S | A | -1.6651 | |
| 103 | Q | A | -1.6596 |