Chain sequence(s) |
A: QVQLVESGGGLVQPGGSLRLSCAASGDSNFDFSEYSLGWFRQAPGQGLEAVAAISADGSETYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAAGPSVLFNPLSPEEYEYWGQGTLVTVSS
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:03) [INFO] Main: Simulation completed successfully. (00:01:04) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | A | -2.1523 | |
2 | V | A | -1.9781 | |
3 | Q | A | -1.2641 | |
4 | L | A | 0.0000 | |
5 | V | A | 0.7126 | |
6 | E | A | 0.0000 | |
7 | S | A | -0.2650 | |
8 | G | A | -0.8939 | |
9 | G | A | 0.0414 | |
10 | G | A | 0.6467 | |
11 | L | A | 1.4116 | |
12 | V | A | -0.1210 | |
13 | Q | A | -1.4371 | |
14 | P | A | -1.7952 | |
15 | G | A | -1.5215 | |
16 | G | A | -1.0046 | |
17 | S | A | -1.3060 | |
18 | L | A | -0.9344 | |
19 | R | A | -2.1771 | |
20 | L | A | 0.0000 | |
21 | S | A | -0.4883 | |
22 | C | A | 0.0000 | |
23 | A | A | -0.2694 | |
24 | A | A | 0.0000 | |
25 | S | A | -1.5323 | |
26 | G | A | -2.4945 | |
27 | D | A | -3.1721 | |
28 | S | A | -2.2573 | |
29 | N | A | -2.5981 | |
30 | F | A | 0.0000 | |
31 | D | A | -3.1961 | |
32 | F | A | 0.0000 | |
33 | S | A | -2.3824 | |
34 | E | A | -2.5660 | |
35 | Y | A | -1.1891 | |
36 | S | A | 0.0000 | |
37 | L | A | 0.0000 | |
38 | G | A | 0.0000 | |
39 | W | A | 0.0000 | |
40 | F | A | 0.0000 | |
41 | R | A | 0.0000 | |
42 | Q | A | -0.7198 | |
43 | A | A | -0.9841 | |
44 | P | A | -0.9983 | |
45 | G | A | -1.2790 | |
46 | Q | A | -1.8122 | |
47 | G | A | -1.1306 | |
48 | L | A | -0.1914 | |
49 | E | A | -0.5143 | |
50 | A | A | 0.0000 | |
51 | V | A | 0.0000 | |
52 | A | A | 0.0000 | |
53 | A | A | 0.0000 | |
54 | I | A | 0.0000 | |
55 | S | A | 0.0000 | |
56 | A | A | 0.0000 | |
57 | D | A | -2.7165 | |
58 | G | A | -1.9165 | |
59 | S | A | -1.7026 | |
60 | E | A | -2.0681 | |
61 | T | A | -0.7348 | |
62 | Y | A | -0.2928 | |
63 | Y | A | -0.7145 | |
64 | A | A | 0.0000 | |
65 | D | A | -2.4636 | |
66 | S | A | -1.7994 | |
67 | V | A | 0.0000 | |
68 | K | A | -2.5785 | |
69 | G | A | -1.7499 | |
70 | R | A | -1.5223 | |
71 | F | A | 0.0000 | |
72 | T | A | -0.8014 | |
73 | I | A | 0.0000 | |
74 | S | A | -0.4224 | |
75 | R | A | -1.3579 | |
76 | D | A | -1.8808 | |
77 | N | A | -2.6820 | |
78 | S | A | -1.7962 | |
79 | K | A | -2.5381 | |
80 | N | A | -2.1697 | |
81 | T | A | 0.0000 | |
82 | L | A | 0.0000 | |
83 | Y | A | -0.6346 | |
84 | L | A | 0.0000 | |
85 | Q | A | -1.2598 | |
86 | M | A | 0.0000 | |
87 | N | A | -1.5186 | |
88 | S | A | -1.3867 | |
89 | L | A | 0.0000 | |
90 | R | A | -2.9075 | |
91 | A | A | -2.0216 | |
92 | E | A | -2.4625 | |
93 | D | A | 0.0000 | |
94 | T | A | -0.5213 | |
95 | A | A | 0.0000 | |
96 | V | A | 0.9076 | |
97 | Y | A | 0.0000 | |
98 | Y | A | 0.3577 | |
99 | C | A | 0.0000 | |
100 | A | A | 0.0000 | |
101 | A | A | 0.0000 | |
102 | G | A | 0.0000 | |
103 | P | A | -0.0189 | |
104 | S | A | 0.2639 | |
105 | V | A | 1.9249 | |
106 | L | A | 1.6350 | |
107 | F | A | 0.8184 | |
108 | N | A | 0.0079 | |
109 | P | A | 0.4665 | |
110 | L | A | 0.9089 | |
111 | S | A | -0.2122 | |
112 | P | A | -0.9681 | |
113 | E | A | -2.2581 | |
114 | E | A | -1.2396 | |
115 | Y | A | 0.0000 | |
116 | E | A | -2.0311 | |
117 | Y | A | -0.9175 | |
118 | W | A | -0.0958 | |
119 | G | A | -0.1320 | |
120 | Q | A | -0.8657 | |
121 | G | A | 0.0000 | |
122 | T | A | 0.6531 | |
123 | L | A | 1.7615 | |
124 | V | A | 0.0000 | |
125 | T | A | 0.3268 | |
126 | V | A | 0.0000 | |
127 | S | A | -0.7446 | |
128 | S | A | -0.4921 |