Project name: KKGHKGH2

Status: done

Started: 2026-05-21 12:35:39
Settings
Chain sequence(s) A: KKGHKGH
B: KKGHKGH
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:55)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:55)
Show buried residues

Minimal score value
-4.9767
Maximal score value
-1.7697
Average score
-3.6849
Total score value
-51.5888

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -3.4560
2 K A -4.1609
3 G A -4.6472
4 H A -4.9767
5 K A -4.2321
6 G A -3.1214
7 H A -2.0760
1 K B -4.9432
2 K B -4.9031
3 G B -3.8436
4 H B -4.1335
5 K B -3.1462
6 G B -2.1792
7 H B -1.7697
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Laboratory of Theory of Biopolymers 2018