| Chain sequence(s) |
H: QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQSPEKGLEWIGEINHGGYVTYNPSLESRVTISVDTSKNQFSLKLSSVTAADTAVYYCARDYGPGNYDWYFDLWGRGTLVTVSS
L: EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWPPALTFGGGTKVEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:06)
[INFO] Main: Simulation completed successfully. (00:01:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.3903 | |
| 2 | V | H | -0.7983 | |
| 3 | Q | H | -1.4639 | |
| 4 | L | H | 0.0000 | |
| 5 | Q | H | -1.2407 | |
| 6 | Q | H | -0.8837 | |
| 7 | W | H | 0.0023 | |
| 8 | G | H | 0.0956 | |
| 9 | A | H | 0.4758 | |
| 11 | G | H | 0.9365 | |
| 12 | L | H | 1.3598 | |
| 13 | L | H | -0.1665 | |
| 14 | K | H | -1.4829 | |
| 15 | P | H | -1.3019 | |
| 16 | S | H | -1.2243 | |
| 17 | E | H | -1.6860 | |
| 18 | T | H | -1.2078 | |
| 19 | L | H | 0.0000 | |
| 20 | S | H | -0.7115 | |
| 21 | L | H | 0.0000 | |
| 22 | T | H | -0.2853 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | 0.0000 | |
| 25 | V | H | 0.0000 | |
| 26 | Y | H | 0.1629 | |
| 27 | G | H | -0.6438 | |
| 28 | G | H | -0.8162 | |
| 29 | S | H | -0.5052 | |
| 30 | F | H | 0.0000 | |
| 35 | S | H | -0.7872 | |
| 36 | G | H | -0.4911 | |
| 37 | Y | H | 0.0933 | |
| 38 | Y | H | 0.2705 | |
| 39 | W | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | I | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.5305 | |
| 45 | S | H | 0.0000 | |
| 46 | P | H | -1.6721 | |
| 47 | E | H | -2.8360 | |
| 48 | K | H | -2.7867 | |
| 49 | G | H | -1.6481 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | 0.0000 | |
| 52 | W | H | 0.0000 | |
| 53 | I | H | 0.0000 | |
| 54 | G | H | 0.0000 | |
| 55 | E | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | N | H | -0.1624 | |
| 58 | H | H | -1.0602 | |
| 59 | G | H | -0.5957 | |
| 63 | G | H | -0.0035 | |
| 64 | Y | H | 1.1554 | |
| 65 | V | H | 0.9898 | |
| 66 | T | H | 0.2759 | |
| 67 | Y | H | -0.4287 | |
| 68 | N | H | -0.7754 | |
| 69 | P | H | -1.2698 | |
| 70 | S | H | -0.8886 | |
| 71 | L | H | 0.0000 | |
| 72 | E | H | -2.0066 | |
| 74 | S | H | -1.2891 | |
| 75 | R | H | -1.3559 | |
| 76 | V | H | 0.0000 | |
| 77 | T | H | -0.8223 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.2169 | |
| 80 | V | H | -0.5218 | |
| 81 | D | H | -1.5088 | |
| 82 | T | H | -1.5278 | |
| 83 | S | H | -1.3930 | |
| 84 | K | H | -2.2938 | |
| 85 | N | H | -1.6145 | |
| 86 | Q | H | -1.2926 | |
| 87 | F | H | 0.0000 | |
| 88 | S | H | -0.4084 | |
| 89 | L | H | 0.0000 | |
| 90 | K | H | -1.2592 | |
| 91 | L | H | 0.0000 | |
| 92 | S | H | -0.9914 | |
| 93 | S | H | -0.9544 | |
| 94 | V | H | 0.0000 | |
| 95 | T | H | -0.5712 | |
| 96 | A | H | -0.2279 | |
| 97 | A | H | -0.4144 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | 0.4373 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.7014 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | -0.1677 | |
| 107 | D | H | 0.0000 | |
| 108 | Y | H | -0.0134 | |
| 109 | G | H | -0.4880 | |
| 110 | P | H | -0.7347 | |
| 111 | G | H | -1.1293 | |
| 111A | N | H | -1.4442 | |
| 112A | Y | H | -0.6390 | |
| 112 | D | H | -0.3949 | |
| 113 | W | H | -0.0092 | |
| 114 | Y | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -0.8008 | |
| 117 | L | H | -0.6460 | |
| 118 | W | H | 0.0000 | |
| 119 | G | H | 0.0000 | |
| 120 | R | H | -2.3646 | |
| 121 | G | H | -0.8746 | |
| 122 | T | H | 0.2718 | |
| 123 | L | H | 1.5245 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.6586 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.3986 | |
| 128 | S | H | -0.7261 | |
| 1 | E | L | -1.4810 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.6870 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.6373 | |
| 6 | Q | L | -0.6826 | |
| 7 | S | L | -0.7416 | |
| 8 | P | L | -0.3806 | |
| 9 | A | L | -0.3749 | |
| 10 | T | L | -0.4342 | |
| 11 | L | L | -0.0666 | |
| 12 | S | L | -0.1406 | |
| 13 | L | L | -0.5180 | |
| 14 | S | L | -0.9107 | |
| 15 | P | L | -1.3180 | |
| 16 | G | L | -1.6944 | |
| 17 | E | L | -2.3941 | |
| 18 | R | L | -2.5805 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.6707 | |
| 21 | L | L | 0.0000 | |
| 22 | S | L | -0.8515 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.3490 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.0450 | |
| 27 | Q | L | -1.7597 | |
| 28 | S | L | -1.3103 | |
| 29 | V | L | 0.0000 | |
| 36 | S | L | -0.5787 | |
| 37 | S | L | -0.3143 | |
| 38 | Y | L | 0.2098 | |
| 39 | L | L | 0.0000 | |
| 40 | A | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.3973 | |
| 46 | P | L | -1.0167 | |
| 47 | G | L | -1.5142 | |
| 48 | Q | L | -2.1492 | |
| 49 | A | L | -1.4067 | |
| 50 | P | L | 0.0000 | |
| 51 | R | L | -1.1297 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -0.4130 | |
| 56 | D | L | -0.5646 | |
| 57 | A | L | 0.0000 | |
| 65 | S | L | -0.9533 | |
| 66 | N | L | -1.4447 | |
| 67 | R | L | -1.4160 | |
| 68 | A | L | -1.0131 | |
| 69 | T | L | -0.7056 | |
| 70 | G | L | -0.6477 | |
| 71 | I | L | 0.0000 | |
| 72 | P | L | -0.4246 | |
| 74 | A | L | -0.3570 | |
| 75 | R | L | -0.6683 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.7073 | |
| 78 | G | L | -0.7169 | |
| 79 | S | L | -0.7671 | |
| 80 | G | L | -1.0616 | |
| 83 | S | L | -0.9836 | |
| 84 | G | L | -1.1040 | |
| 85 | T | L | -1.7339 | |
| 86 | D | L | -2.0879 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.7528 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.6031 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.2623 | |
| 93 | S | L | -1.5726 | |
| 94 | L | L | 0.0000 | |
| 95 | E | L | -1.8857 | |
| 96 | P | L | -1.1745 | |
| 97 | E | L | -1.8940 | |
| 98 | D | L | 0.0000 | |
| 99 | F | L | -0.2624 | |
| 100 | A | L | 0.0000 | |
| 101 | V | L | -0.1092 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | R | L | 0.0000 | |
| 108 | S | L | -0.4680 | |
| 109 | N | L | -0.6998 | |
| 110 | W | L | 0.1705 | |
| 113 | P | L | -0.3055 | |
| 114 | P | L | -0.5404 | |
| 115 | A | L | 0.0000 | |
| 116 | L | L | 0.0000 | |
| 117 | T | L | 0.0364 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.8379 | |
| 121 | G | L | -0.4740 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -0.9763 | |
| 124 | V | L | 0.0000 | |
| 125 | E | L | 0.0588 | |
| 126 | I | L | 1.0374 | |
| 127 | K | L | -0.8887 |