Project name: query_structure

Status: done

Started: 2026-03-16 23:28:48
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Chain sequence(s) A: GSARDDVLIGDAGANSLVGLAGNDVLSGGAGDDLLLGDEGSDLLSGDAGNDVLDGGQGDDTYLFGVGYGHDRIVESGGGHDTIRINAGADQLWFARQGNDLEIRILGTDDALTVHDWYRDADHRVEIIHAANQAVDQAGIEKLVEAMAQYPD
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:13)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:14)
Show buried residues

Minimal score value
-3.0612
Maximal score value
2.1668
Average score
-0.9587
Total score value
-145.7237

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.3528
2 S A -1.0023
3 A A -1.6051
4 R A -2.8662
5 D A -2.8154
6 D A -0.5741
7 V A 1.7396
8 L A 2.0292
9 I A 2.1668
10 G A -0.0346
11 D A -1.4868
12 A A -1.2434
13 G A -1.2808
14 A A -1.2648
15 N A -0.6347
16 S A 0.0050
17 L A 0.9310
18 V A 0.7418
19 G A 0.0000
20 L A -0.6346
21 A A -1.8402
22 G A -2.5828
23 N A -2.5441
24 D A 0.0000
25 V A 1.1408
26 L A 0.0000
27 S A 1.0438
28 G A 0.0000
29 G A -0.6747
30 A A -1.2768
31 G A -1.6951
32 D A -2.3925
33 D A 0.0000
34 L A 0.1494
35 L A 0.0000
36 L A 0.5046
37 G A 0.0000
38 D A -1.6933
39 E A -2.8769
40 G A -2.6912
41 S A -2.1852
42 D A 0.0000
43 L A 0.4481
44 L A 0.0000
45 S A 0.0000
46 G A 0.0000
47 D A -0.5997
48 A A -0.7554
49 G A -1.6909
50 N A -2.4249
51 D A 0.0000
52 V A -0.3692
53 L A 0.0000
54 D A -0.1578
55 G A 0.0000
56 G A -1.7213
57 Q A -2.8883
58 G A -2.6962
59 D A -2.8158
60 D A 0.0000
61 T A -0.4507
62 Y A 0.0000
63 L A -0.4120
64 F A 0.0000
65 G A 0.0000
66 V A 1.0105
67 G A -0.0005
68 Y A -0.3122
69 G A -1.5015
70 H A -2.2498
71 D A 0.0000
72 R A -1.5504
73 I A 0.0000
74 V A -0.0799
75 E A 0.0000
76 S A -1.0470
77 G A -1.9114
78 G A -1.9640
79 G A -2.2038
80 H A -2.0348
81 D A 0.0000
82 T A -1.0586
83 I A 0.0000
84 R A -1.7897
85 I A 0.0000
86 N A -1.3869
87 A A 0.0000
88 G A -1.7418
89 A A -1.7995
90 D A -2.2183
91 Q A -1.8794
92 L A 0.0000
93 W A -0.3777
94 F A 0.0000
95 A A -1.6270
96 R A -2.9391
97 Q A -2.6755
98 G A -2.3429
99 N A -2.8720
100 D A -2.6098
101 L A 0.0000
102 E A -1.7543
103 I A 0.0000
104 R A -0.8929
105 I A 0.0000
106 L A -0.2363
107 G A -0.4994
108 T A -0.7927
109 D A -1.8186
110 D A 0.0000
111 A A 0.0000
112 L A 0.0000
113 T A -1.3123
114 V A 0.0000
115 H A -1.4619
116 D A -2.1978
117 W A 0.0000
118 Y A -2.3006
119 R A -3.0612
120 D A -2.5104
121 A A -1.8700
122 D A -2.7205
123 H A -2.0201
124 R A -1.6744
125 V A 0.0000
126 E A -1.6403
127 I A -1.0303
128 I A 0.0000
129 H A -1.6460
130 A A 0.0000
131 A A -1.5721
132 N A -2.0510
133 Q A -1.9054
134 A A -1.2914
135 V A 0.0000
136 D A -2.0759
137 Q A -1.5522
138 A A -1.2327
139 G A -1.5682
140 I A 0.0000
141 E A -2.1664
142 K A -2.4289
143 L A -1.2446
144 V A 0.0000
145 E A -2.6870
146 A A -1.3220
147 M A -0.9237
148 A A -1.2598
149 Q A -1.1186
150 Y A 0.0251
151 P A -0.7356
152 D A -1.6798
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Laboratory of Theory of Biopolymers 2018