Chain sequence(s) |
A: SAVKALFDYKAQREDELTFTKSAIIQNVEKQDGGWWRGDYGGKKQLWFPSNYVEE
P: QPPVPPQRPM input PDB |
Selected Chain(s) | A,P |
Distance of aggregation | 5 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | QA7P |
Energy difference between WT (input) and mutated protein (by FoldX) | 0.301865 kcal/mol |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] FoldX: Building mutant model (00:00:43) [INFO] FoldX: Starting FoldX energy minimalization (00:00:46) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:02) [INFO] Main: Simulation completed successfully. (00:01:03) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
5 | S | A | -0.3161 | |
6 | A | A | -0.1070 | |
7 | V | A | 0.0000 | |
8 | K | A | -0.5038 | |
9 | A | A | 0.0000 | |
10 | L | A | 0.4884 | |
11 | F | A | -0.1396 | |
12 | D | A | -1.9438 | |
13 | Y | A | 0.0000 | |
14 | K | A | -1.7038 | |
15 | A | A | -0.5275 | |
16 | Q | A | -1.4038 | |
17 | R | A | -1.6764 | |
18 | E | A | -2.1064 | |
19 | D | A | -0.7591 | |
20 | E | A | 0.0000 | |
21 | L | A | 0.0000 | |
22 | T | A | -0.2467 | |
23 | F | A | 0.0000 | |
24 | T | A | -0.6537 | |
25 | K | A | -1.9128 | |
26 | S | A | -0.4847 | |
27 | A | A | 0.0000 | |
28 | I | A | 1.3771 | |
29 | I | A | 0.0000 | |
30 | Q | A | -0.9166 | |
31 | N | A | -1.2521 | |
32 | V | A | -0.3565 | |
33 | E | A | -1.9734 | |
34 | K | A | -1.7600 | |
35 | Q | A | -1.7599 | |
36 | D | A | -2.1009 | |
37 | G | A | -0.8254 | |
38 | G | A | -0.2027 | |
39 | W | A | 0.0000 | |
40 | W | A | -0.0687 | |
41 | R | A | -0.5283 | |
42 | G | A | 0.0000 | |
43 | D | A | -0.4561 | |
44 | Y | A | 0.2384 | |
45 | G | A | -0.4843 | |
46 | G | A | -0.6762 | |
47 | K | A | -1.0778 | |
48 | K | A | -1.9140 | |
49 | Q | A | -0.6513 | |
50 | L | A | 0.1798 | |
51 | W | A | 0.1751 | |
52 | F | A | 0.0000 | |
53 | P | A | 0.0000 | |
54 | S | A | -0.1535 | |
55 | N | A | -0.6563 | |
56 | Y | A | 0.0000 | |
57 | V | A | 0.0000 | |
58 | E | A | -1.7244 | |
59 | E | A | -2.0722 | |
1 | Q | P | -1.2441 | |
2 | P | P | -0.4807 | |
3 | P | P | 0.2228 | |
4 | V | P | 1.7549 | |
5 | P | P | 0.2618 | |
6 | P | P | -0.1074 | |
7 | A | P | -0.0431 | mutated: QA7P |
8 | R | P | -0.4802 | |
9 | P | P | -0.1425 | |
10 | M | P | 1.0067 |