| Chain sequence(s) |
A: MTAIIKEIVSRNKRRYQEDGFDLDLTYIYPNIIAMGFPAERLEGVYRNNIDDVVRFLDSKHKNHYKIYNLCAERHYDTAKFNCRVAQYPFEDHNPPQLELIKPFCEDLDQWLSEDDNHVAAIHCKAGKGRTGVMICAYLLHRGKFLKAQEALDFYGEVRTRDKKGVTIPSQRRYVYYYSYLLKNHLDYRPVALLFHKMMFETIPMFSGGTCNPQFVVCQLKVKIYSSNSGPTRREDKFMYFEFPQPLPVCGDIKVEFFHKQNKMLKKDKMFHFWVNTFFIPGPEETSEKVENGSLCDQEIDSICSIERADNDKEYLVLTLTKNDLDKANKDKANRYFSPNFKVKLYFTKTVEEPSNPEASSSTSVTPDVSDNEPDHYRYSDTTDSDPENEPFDEDQHTQITKV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Mutated residues | MI1A |
| Energy difference between WT (input) and mutated protein (by FoldX) | 0.687442 kcal/mol |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] FoldX: Building mutant model (00:07:39)
[INFO] FoldX: Starting FoldX energy minimalization (00:07:48)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:11:42)
[INFO] Main: Simulation completed successfully. (00:11:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | A | 2.0050 | mutated: MI1A |
| 2 | T | A | 0.3230 | |
| 3 | A | A | 0.4045 | |
| 4 | I | A | 2.1186 | |
| 5 | I | A | 0.8568 | |
| 6 | K | A | -0.4193 | |
| 7 | E | A | -1.5021 | |
| 8 | I | A | 1.7627 | |
| 9 | V | A | 0.7830 | |
| 10 | S | A | 0.0000 | |
| 11 | R | A | -1.7380 | |
| 12 | N | A | -0.8650 | |
| 13 | K | A | 0.0000 | |
| 14 | R | A | -1.4015 | |
| 15 | R | A | -0.4732 | |
| 16 | Y | A | -0.1353 | |
| 17 | Q | A | -1.5704 | |
| 18 | E | A | -2.3535 | |
| 19 | D | A | -2.1973 | |
| 20 | G | A | -0.7879 | |
| 21 | F | A | 0.0000 | |
| 22 | D | A | -0.7131 | |
| 23 | L | A | 0.0000 | |
| 24 | D | A | 0.0000 | |
| 25 | L | A | 0.0000 | |
| 26 | T | A | 0.0599 | |
| 27 | Y | A | 0.3656 | |
| 28 | I | A | 0.0000 | |
| 29 | Y | A | 0.2703 | |
| 30 | P | A | -0.2652 | |
| 31 | N | A | -0.4159 | |
| 32 | I | A | 0.0000 | |
| 33 | I | A | 0.0000 | |
| 34 | A | A | 0.0000 | |
| 35 | M | A | 0.0000 | |
| 36 | G | A | 0.0000 | |
| 37 | F | A | 0.0000 | |
| 38 | P | A | 0.0000 | |
| 39 | A | A | 0.0000 | |
| 40 | E | A | -0.9782 | |
| 41 | R | A | -1.6826 | |
| 42 | L | A | 1.1084 | |
| 43 | E | A | -0.3210 | |
| 44 | G | A | 0.0000 | |
| 45 | V | A | 0.7536 | |
| 46 | Y | A | 0.4327 | |
| 47 | R | A | -0.2231 | |
| 48 | N | A | 0.0000 | |
| 49 | N | A | -0.5278 | |
| 50 | I | A | 0.0000 | |
| 51 | D | A | -1.9463 | |
| 52 | D | A | -1.1968 | |
| 53 | V | A | 0.0000 | |
| 54 | V | A | -0.0187 | |
| 55 | R | A | -1.4227 | |
| 56 | F | A | 0.0000 | |
| 57 | L | A | 0.0000 | |
| 58 | D | A | -0.8611 | |
| 59 | S | A | -0.4770 | |
| 60 | K | A | -0.9718 | |
| 61 | H | A | -0.6021 | |
| 62 | K | A | -2.0389 | |
| 63 | N | A | -1.6287 | |
| 64 | H | A | -0.5049 | |
| 65 | Y | A | 0.0000 | |
| 66 | K | A | -0.2731 | |
| 67 | I | A | 0.0000 | |
| 68 | Y | A | 0.0000 | |
| 69 | N | A | 0.0000 | |
| 70 | L | A | 0.0000 | |
| 71 | C | A | 0.0000 | |
| 72 | A | A | -0.1090 | |
| 73 | E | A | -1.0606 | |
| 74 | R | A | -1.7925 | |
| 75 | H | A | -1.2592 | |
| 76 | Y | A | 0.0000 | |
| 77 | D | A | -1.7940 | |
| 78 | T | A | -0.3371 | |
| 79 | A | A | -0.0331 | |
| 80 | K | A | -0.9233 | |
| 81 | F | A | 0.0000 | |
| 82 | N | A | -1.1431 | |
| 83 | C | A | 0.2501 | |
| 84 | R | A | -1.3278 | |
| 85 | V | A | -0.0889 | |
| 86 | A | A | -0.1277 | |
| 87 | Q | A | -0.9003 | |
| 88 | Y | A | -0.0375 | |
| 89 | P | A | -0.0654 | |
| 90 | F | A | 0.0000 | |
| 91 | E | A | -1.4382 | |
| 92 | D | A | -0.7670 | |
| 93 | H | A | -0.5980 | |
| 94 | N | A | -0.2754 | |
| 95 | P | A | 0.0000 | |
| 96 | P | A | 0.0000 | |
| 97 | Q | A | -0.3950 | |
| 98 | L | A | 0.0000 | |
| 99 | E | A | -1.7793 | |
| 100 | L | A | -0.0975 | |
| 101 | I | A | 0.0000 | |
| 102 | K | A | -1.2287 | |
| 103 | P | A | -0.3453 | |
| 104 | F | A | 0.0000 | |
| 105 | C | A | 0.0000 | |
| 106 | E | A | -1.6732 | |
| 107 | D | A | -0.7082 | |
| 108 | L | A | 0.0000 | |
| 109 | D | A | -0.4543 | |
| 110 | Q | A | -1.2413 | |
| 111 | W | A | 0.0000 | |
| 112 | L | A | 0.1577 | |
| 113 | S | A | -0.5035 | |
| 114 | E | A | -1.9409 | |
| 115 | D | A | -1.1099 | |
| 116 | D | A | -2.1000 | |
| 117 | N | A | -1.5925 | |
| 118 | H | A | 0.0000 | |
| 119 | V | A | 0.0000 | |
| 120 | A | A | 0.0000 | |
| 121 | A | A | 0.0000 | |
| 122 | I | A | 0.0000 | |
| 123 | H | A | 0.0000 | |
| 124 | C | A | 0.0000 | |
| 125 | K | A | -0.5402 | |
| 126 | A | A | -0.0807 | |
| 127 | G | A | 0.0000 | |
| 128 | K | A | -0.4254 | |
| 129 | G | A | -0.1479 | |
| 130 | R | A | 0.0000 | |
| 131 | T | A | 0.0000 | |
| 132 | G | A | 0.0000 | |
| 133 | V | A | 0.0000 | |
| 134 | M | A | 0.0000 | |
| 135 | I | A | 0.0000 | |
| 136 | C | A | 0.0000 | |
| 137 | A | A | 0.0000 | |
| 138 | Y | A | 0.0000 | |
| 139 | L | A | 0.0000 | |
| 140 | L | A | 0.0000 | |
| 141 | H | A | -0.5329 | |
| 142 | R | A | -1.8307 | |
| 143 | G | A | -0.9469 | |
| 144 | K | A | -0.9900 | |
| 145 | F | A | 0.4155 | |
| 146 | L | A | 1.4517 | |
| 147 | K | A | -0.5727 | |
| 148 | A | A | 0.0000 | |
| 149 | Q | A | -0.6418 | |
| 150 | E | A | -0.8299 | |
| 151 | A | A | 0.0000 | |
| 152 | L | A | 0.0000 | |
| 153 | D | A | -1.1899 | |
| 154 | F | A | 0.1695 | |
| 155 | Y | A | 0.0000 | |
| 156 | G | A | 0.0000 | |
| 157 | E | A | -1.4042 | |
| 158 | V | A | 0.0416 | |
| 159 | R | A | 0.0000 | |
| 160 | T | A | 0.0000 | |
| 161 | R | A | -1.9555 | |
| 162 | D | A | -1.2520 | |
| 163 | K | A | -2.2584 | |
| 164 | K | A | -1.9428 | |
| 165 | G | A | 0.0000 | |
| 166 | V | A | 0.0000 | |
| 167 | T | A | -0.0038 | |
| 168 | I | A | 0.2379 | |
| 169 | P | A | 0.0000 | |
| 170 | S | A | 0.0000 | |
| 171 | Q | A | 0.0000 | |
| 172 | R | A | -0.3536 | |
| 173 | R | A | 0.0000 | |
| 174 | Y | A | 0.0000 | |
| 175 | V | A | 0.0000 | |
| 176 | Y | A | 0.1999 | |
| 177 | Y | A | 0.0000 | |
| 178 | Y | A | 0.0000 | |
| 179 | S | A | 0.0280 | |
| 180 | Y | A | 0.1798 | |
| 181 | L | A | 0.0000 | |
| 182 | L | A | 0.1425 | |
| 183 | K | A | -1.6917 | |
| 184 | N | A | -0.8766 | |
| 185 | H | A | -0.9380 | |
| 186 | L | A | 0.1603 | |
| 187 | D | A | -1.6328 | |
| 188 | Y | A | -0.4954 | |
| 189 | R | A | -1.8317 | |
| 190 | P | A | -0.3738 | |
| 191 | V | A | 0.3360 | |
| 192 | A | A | 0.1133 | |
| 193 | L | A | 0.0000 | |
| 194 | L | A | 0.4002 | |
| 195 | F | A | 0.0000 | |
| 196 | H | A | -0.1656 | |
| 197 | K | A | -0.5212 | |
| 198 | M | A | 0.0000 | |
| 199 | M | A | 0.0000 | |
| 200 | F | A | 0.0000 | |
| 201 | E | A | -0.8568 | |
| 202 | T | A | -0.2856 | |
| 203 | I | A | 0.1993 | |
| 204 | P | A | 0.0000 | |
| 205 | M | A | 0.2462 | |
| 206 | F | A | 0.2213 | |
| 207 | S | A | -0.1452 | |
| 208 | G | A | -0.5670 | |
| 209 | G | A | -0.5211 | |
| 210 | T | A | -0.0778 | |
| 211 | C | A | 0.0000 | |
| 212 | N | A | -0.3251 | |
| 213 | P | A | 0.0000 | |
| 214 | Q | A | -0.1816 | |
| 215 | F | A | 0.0000 | |
| 216 | V | A | 0.1753 | |
| 217 | V | A | 0.0000 | |
| 218 | C | A | -0.2257 | |
| 219 | Q | A | -0.2291 | |
| 220 | L | A | 0.2560 | |
| 221 | K | A | -1.2743 | |
| 222 | V | A | 1.1601 | |
| 223 | K | A | -1.2639 | |
| 224 | I | A | 0.2912 | |
| 225 | Y | A | 0.3233 | |
| 226 | S | A | -0.0733 | |
| 227 | S | A | 0.0000 | |
| 228 | N | A | -1.3001 | |
| 229 | S | A | -0.4197 | |
| 230 | G | A | -0.1553 | |
| 231 | P | A | -0.1004 | |
| 232 | T | A | -0.4173 | |
| 233 | R | A | -2.1313 | |
| 234 | R | A | -2.1142 | |
| 235 | E | A | -2.0328 | |
| 236 | D | A | -2.3196 | |
| 237 | K | A | -1.7954 | |
| 238 | F | A | 0.0279 | |
| 239 | M | A | 0.0000 | |
| 240 | Y | A | 0.1611 | |
| 241 | F | A | 0.0000 | |
| 242 | E | A | -1.6207 | |
| 243 | F | A | 0.0000 | |
| 244 | P | A | -0.4725 | |
| 245 | Q | A | -1.2622 | |
| 246 | P | A | -0.2987 | |
| 247 | L | A | 0.0851 | |
| 248 | P | A | -0.1789 | |
| 249 | V | A | 0.0000 | |
| 250 | C | A | 0.1539 | |
| 251 | G | A | 0.0000 | |
| 252 | D | A | 0.0000 | |
| 253 | I | A | 0.0000 | |
| 254 | K | A | -0.2565 | |
| 255 | V | A | 0.0000 | |
| 256 | E | A | -0.2156 | |
| 257 | F | A | 0.0000 | |
| 258 | F | A | 0.1120 | |
| 259 | H | A | 0.0000 | |
| 260 | K | A | -0.7637 | |
| 261 | Q | A | -0.9246 | |
| 262 | N | A | -1.6809 | |
| 263 | K | A | -1.7388 | |
| 264 | M | A | 1.0310 | |
| 265 | L | A | 1.4448 | |
| 266 | K | A | -1.4898 | |
| 267 | K | A | -1.2686 | |
| 268 | D | A | -0.5808 | |
| 269 | K | A | -0.6695 | |
| 270 | M | A | 0.0000 | |
| 271 | F | A | 0.0000 | |
| 272 | H | A | -0.1270 | |
| 273 | F | A | 0.0000 | |
| 274 | W | A | 0.0000 | |
| 275 | V | A | 0.0000 | |
| 276 | N | A | 0.0000 | |
| 277 | T | A | 0.0000 | |
| 278 | F | A | 0.3102 | |
| 279 | F | A | 0.0000 | |
| 280 | I | A | 0.0000 | |
| 281 | P | A | -0.0372 | |
| 282 | G | A | -0.1029 | |
| 283 | P | A | -0.5073 | |
| 284 | E | A | -2.1751 | |
| 285 | E | A | -2.1571 | |
| 286 | T | A | -0.4331 | |
| 287 | S | A | -0.5703 | |
| 288 | E | A | -2.1657 | |
| 289 | K | A | -1.7001 | |
| 290 | V | A | 1.1221 | |
| 291 | E | A | -1.7221 | |
| 292 | N | A | -1.6905 | |
| 293 | G | A | -0.7459 | |
| 294 | S | A | -0.0211 | |
| 295 | L | A | 1.5942 | |
| 296 | C | A | 0.5614 | |
| 297 | D | A | -1.1569 | |
| 298 | Q | A | -1.7080 | |
| 299 | E | A | -1.9936 | |
| 300 | I | A | -0.2143 | |
| 301 | D | A | -0.6386 | |
| 302 | S | A | -0.2647 | |
| 303 | I | A | 0.3319 | |
| 304 | C | A | 0.1276 | |
| 305 | S | A | -0.0305 | |
| 306 | I | A | 0.5841 | |
| 307 | E | A | -1.6362 | |
| 308 | R | A | -2.3201 | |
| 309 | A | A | -0.6419 | |
| 310 | D | A | -2.0105 | |
| 311 | N | A | -1.8997 | |
| 312 | D | A | -2.2052 | |
| 313 | K | A | -1.7408 | |
| 314 | E | A | -2.2362 | |
| 315 | Y | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | V | A | 0.0000 | |
| 318 | L | A | 0.0000 | |
| 319 | T | A | -0.0546 | |
| 320 | L | A | 0.0000 | |
| 321 | T | A | -0.1037 | |
| 322 | K | A | 0.0000 | |
| 323 | N | A | -1.3604 | |
| 324 | D | A | -0.5982 | |
| 325 | L | A | 0.0000 | |
| 326 | D | A | 0.0000 | |
| 327 | K | A | -0.9435 | |
| 328 | A | A | 0.0000 | |
| 329 | N | A | -0.4787 | |
| 330 | K | A | -0.9185 | |
| 331 | D | A | -0.6820 | |
| 332 | K | A | -1.7299 | |
| 333 | A | A | -0.3595 | |
| 334 | N | A | -0.9460 | |
| 335 | R | A | -1.8917 | |
| 336 | Y | A | 0.0499 | |
| 337 | F | A | 0.0000 | |
| 338 | S | A | -0.0805 | |
| 339 | P | A | -0.4887 | |
| 340 | N | A | -1.3186 | |
| 341 | F | A | 0.0000 | |
| 342 | K | A | -0.5844 | |
| 343 | V | A | 0.0000 | |
| 344 | K | A | -0.3427 | |
| 345 | L | A | 0.0000 | |
| 346 | Y | A | 0.1364 | |
| 347 | F | A | 0.0000 | |
| 348 | T | A | -0.1409 | |
| 349 | K | A | -0.7311 | |
| 350 | T | A | 0.0408 | |
| 351 | V | A | 0.9047 | |
| 352 | E | A | -1.9139 | |
| 353 | E | A | -2.1908 | |
| 354 | P | A | -0.6214 | |
| 355 | S | A | -0.4882 | |
| 356 | N | A | -1.3565 | |
| 357 | P | A | -0.8123 | |
| 358 | E | A | -1.8558 | |
| 359 | A | A | -0.3114 | |
| 360 | S | A | -0.2408 | |
| 361 | S | A | -0.2906 | |
| 362 | S | A | -0.2649 | |
| 363 | T | A | -0.1504 | |
| 364 | S | A | 0.0955 | |
| 365 | V | A | 1.7213 | |
| 366 | T | A | 0.2049 | |
| 367 | P | A | -0.5926 | |
| 368 | D | A | -1.5163 | |
| 369 | V | A | 1.4113 | |
| 370 | S | A | -0.2122 | |
| 371 | D | A | -2.0629 | |
| 372 | N | A | -1.9353 | |
| 373 | E | A | -2.0985 | |
| 374 | P | A | -0.9132 | |
| 375 | D | A | -2.0147 | |
| 376 | H | A | -1.0724 | |
| 377 | Y | A | 0.7966 | |
| 378 | R | A | -1.3644 | |
| 379 | Y | A | 0.9416 | |
| 380 | S | A | -0.2993 | |
| 381 | D | A | -1.8409 | |
| 382 | T | A | -0.4058 | |
| 383 | T | A | -0.4140 | |
| 384 | D | A | -1.6802 | |
| 385 | S | A | -0.7617 | |
| 386 | D | A | -1.8556 | |
| 387 | P | A | -0.8988 | |
| 388 | E | A | -2.0898 | |
| 389 | N | A | -1.9225 | |
| 390 | E | A | -2.0955 | |
| 391 | P | A | -0.2254 | |
| 392 | F | A | 1.5669 | |
| 393 | D | A | -1.7683 | |
| 394 | E | A | -2.4750 | |
| 395 | D | A | -2.3455 | |
| 396 | Q | A | -1.7195 | |
| 397 | H | A | -1.2293 | |
| 398 | T | A | -0.4773 | |
| 399 | Q | A | -0.8404 | |
| 400 | I | A | 1.7786 | |
| 401 | T | A | -0.0112 | |
| 402 | K | A | -1.3964 | |
| 403 | V | A | 1.4692 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine