| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFADIVKDGKVVVPKVSGYQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKFGDTENPTEPQHCGPDDRVAFSFDPKQTQLFIVGCEPPTGEHWDLAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFYRRCGPDGHPLPSAPPPSPLYVPPPPSSPYAVLPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPAPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:07)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9477 | |
| 2 | L | A | 1.9661 | |
| 3 | P | A | 0.8324 | |
| 4 | P | A | 0.3850 | |
| 5 | T | A | 0.1276 | |
| 6 | T | A | 0.1317 | |
| 7 | P | A | 0.1974 | |
| 8 | V | A | 1.2116 | |
| 9 | A | A | 0.0876 | |
| 10 | K | A | -1.0325 | |
| 11 | V | A | -0.1810 | |
| 12 | Q | A | -1.4144 | |
| 13 | S | A | -1.5600 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4224 | |
| 16 | E | A | -2.4411 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4582 | |
| 20 | P | A | 0.1284 | |
| 21 | T | A | 0.1582 | |
| 22 | S | A | -0.0957 | |
| 23 | L | A | 0.0896 | |
| 24 | F | A | -0.0339 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.2895 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.9005 | |
| 31 | R | A | -2.6877 | |
| 32 | L | A | -0.8041 | |
| 33 | L | A | 1.1486 | |
| 34 | T | A | 1.3525 | |
| 35 | V | A | 1.7906 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | 0.2629 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | 0.2202 | |
| 40 | A | A | 0.0893 | |
| 41 | D | A | -0.1009 | |
| 42 | I | A | 1.4951 | |
| 43 | V | A | 1.1993 | |
| 44 | K | A | -1.3674 | |
| 45 | D | A | -2.4461 | |
| 46 | G | A | -1.4572 | |
| 47 | K | A | -1.1310 | |
| 48 | V | A | 1.5203 | |
| 49 | V | A | 1.9800 | |
| 50 | V | A | 1.5160 | |
| 51 | P | A | 0.7677 | |
| 52 | K | A | -0.0362 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1441 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.3561 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2213 | |
| 70 | K | A | -1.7695 | |
| 71 | F | A | -0.6334 | |
| 72 | A | A | -0.5721 | |
| 73 | L | A | -0.8641 | |
| 74 | P | A | -1.2102 | |
| 75 | Q | A | -2.5058 | |
| 76 | K | A | -3.1066 | |
| 77 | D | A | -2.9850 | |
| 78 | F | A | -1.6681 | |
| 79 | Y | A | -1.8745 | |
| 80 | D | A | -2.6699 | |
| 81 | P | A | -2.2967 | |
| 82 | E | A | -3.0443 | |
| 83 | K | A | -3.3873 | |
| 84 | E | A | -2.4485 | |
| 85 | R | A | -1.2847 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6713 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9686 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3645 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.6982 | |
| 99 | G | A | -0.5288 | |
| 100 | P | A | -0.3758 | |
| 101 | L | A | 0.1015 | |
| 102 | G | A | -0.1718 | |
| 103 | K | A | -0.5881 | |
| 104 | G | A | -0.4268 | |
| 105 | T | A | -0.4438 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1324 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4119 | |
| 110 | L | A | 0.0940 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.1642 | |
| 113 | K | A | -0.3579 | |
| 114 | F | A | 0.0000 | |
| 115 | G | A | -1.3103 | |
| 116 | D | A | -1.7066 | |
| 117 | T | A | -0.9784 | |
| 118 | E | A | -1.9039 | |
| 119 | N | A | -2.2079 | |
| 120 | P | A | -2.0967 | |
| 121 | T | A | -1.7350 | |
| 122 | E | A | -2.5911 | |
| 123 | P | A | -1.4873 | |
| 124 | Q | A | -1.7954 | |
| 125 | H | A | -1.2075 | |
| 126 | C | A | -1.0845 | |
| 127 | G | A | -1.3969 | |
| 128 | P | A | -1.4966 | |
| 129 | D | A | -2.2747 | |
| 130 | D | A | -1.8419 | |
| 131 | R | A | -1.1677 | |
| 132 | V | A | 0.2150 | |
| 133 | A | A | 0.4483 | |
| 134 | F | A | 0.2689 | |
| 135 | S | A | -0.0724 | |
| 136 | F | A | 0.0000 | |
| 137 | D | A | -0.5207 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | -0.2084 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5628 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.1946 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.1720 | |
| 157 | D | A | 0.3478 | |
| 158 | L | A | 0.8141 | |
| 159 | A | A | 0.1841 | |
| 160 | E | A | -1.4505 | |
| 161 | P | A | -0.2111 | |
| 162 | C | A | 0.1879 | |
| 163 | P | A | -0.1673 | |
| 164 | G | A | -0.0761 | |
| 165 | L | A | 0.5930 | |
| 166 | P | A | -0.1144 | |
| 167 | P | A | -0.3408 | |
| 168 | G | A | -0.4255 | |
| 169 | A | A | -0.0318 | |
| 170 | C | A | 0.6510 | |
| 171 | P | A | 0.5339 | |
| 172 | P | A | 0.8623 | |
| 173 | I | A | 2.0266 | |
| 174 | Q | A | 0.8792 | |
| 175 | L | A | 1.5072 | |
| 176 | V | A | 0.8702 | |
| 177 | N | A | -0.2913 | |
| 178 | S | A | 0.0333 | |
| 179 | V | A | 0.4318 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3832 | |
| 182 | D | A | 0.0855 | |
| 183 | G | A | -0.1570 | |
| 184 | D | A | -0.5322 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1299 | |
| 190 | F | A | 0.0690 | |
| 191 | G | A | -0.0977 | |
| 192 | N | A | -0.2482 | |
| 193 | M | A | -0.1039 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.3955 | |
| 197 | E | A | -2.6021 | |
| 198 | L | A | -1.2273 | |
| 199 | Q | A | -2.5597 | |
| 200 | Q | A | -3.3023 | |
| 201 | D | A | -3.4522 | |
| 202 | R | A | -3.3285 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.4541 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3552 | |
| 211 | S | A | -1.6896 | |
| 212 | T | A | -1.4222 | |
| 213 | R | A | -2.0561 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1522 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3099 | |
| 220 | L | A | 0.5839 | |
| 221 | K | A | -1.1564 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9060 | |
| 224 | N | A | -1.5089 | |
| 225 | E | A | -1.2454 | |
| 226 | A | A | -0.6055 | |
| 227 | Y | A | -0.4040 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.6746 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1441 | |
| 234 | F | A | 0.0415 | |
| 235 | G | A | -0.9047 | |
| 236 | R | A | -2.6380 | |
| 237 | R | A | -2.8841 | |
| 238 | E | A | -2.1214 | |
| 239 | Q | A | -0.1563 | |
| 240 | V | A | 1.4661 | |
| 241 | Y | A | 1.1780 | |
| 242 | A | A | 0.1489 | |
| 243 | R | A | -1.2186 | |
| 244 | H | A | -0.9383 | |
| 245 | F | A | -0.0111 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.6454 | |
| 249 | C | A | -1.0163 | |
| 250 | G | A | -0.9921 | |
| 251 | P | A | -0.9509 | |
| 252 | D | A | -1.3781 | |
| 253 | G | A | -1.2921 | |
| 254 | H | A | -1.4294 | |
| 255 | P | A | -0.8918 | |
| 256 | L | A | 0.3683 | |
| 257 | P | A | -0.0395 | |
| 258 | S | A | -0.0340 | |
| 259 | A | A | 0.2336 | |
| 260 | P | A | -0.3194 | |
| 261 | P | A | -0.1922 | |
| 262 | P | A | 0.0597 | |
| 263 | S | A | 0.5319 | |
| 264 | P | A | 0.6874 | |
| 265 | L | A | 1.9119 | |
| 266 | Y | A | 1.7285 | |
| 267 | V | A | 1.9455 | |
| 268 | P | A | 1.1376 | |
| 269 | P | A | 0.6712 | |
| 270 | P | A | -0.1713 | |
| 271 | P | A | -0.1397 | |
| 272 | S | A | -0.1564 | |
| 273 | S | A | 0.1790 | |
| 274 | P | A | 0.0885 | |
| 275 | Y | A | 1.3268 | |
| 276 | A | A | 1.2381 | |
| 277 | V | A | 2.1662 | |
| 278 | L | A | 1.5398 | |
| 279 | P | A | 0.2328 | |
| 280 | P | A | -0.3713 | |
| 281 | T | A | -0.4043 | |
| 282 | D | A | -0.9627 | |
| 283 | Y | A | 0.8034 | |
| 284 | F | A | 0.6857 | |
| 285 | G | A | 0.2124 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9066 | |
| 291 | L | A | 1.6138 | |
| 292 | V | A | 0.6353 | |
| 293 | S | A | -0.1536 | |
| 294 | S | A | -0.9538 | |
| 295 | D | A | -1.8436 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1059 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6369 | |
| 301 | R | A | -1.8516 | |
| 302 | P | A | -0.9737 | |
| 303 | F | A | -0.2131 | |
| 304 | W | A | -0.5618 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0864 | |
| 307 | R | A | -2.9289 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6614 | |
| 310 | G | A | -1.4251 | |
| 311 | N | A | -1.3554 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.7919 | |
| 319 | N | A | -0.9140 | |
| 320 | E | A | -1.0273 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3183 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.0622 | |
| 333 | N | A | 0.5518 | |
| 334 | F | A | 1.7633 | |
| 335 | T | A | 0.8733 | |
| 336 | I | A | 0.4470 | |
| 337 | S | A | -0.8365 | |
| 338 | Q | A | -1.5000 | |
| 339 | Q | A | -0.8703 | |
| 340 | L | A | 0.7920 | |
| 341 | C | A | 0.4216 | |
| 342 | T | A | 0.1477 | |
| 343 | P | A | -0.2753 | |
| 344 | A | A | 0.1136 | |
| 345 | P | A | 0.1755 | |
| 346 | N | A | -0.2790 | |
| 347 | V | A | 1.5566 | |
| 348 | Y | A | 1.4558 | |
| 349 | D | A | 0.0874 | |
| 350 | P | A | -0.3215 | |
| 351 | S | A | -0.2613 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5731 | |
| 354 | K | A | -1.6688 | |
| 355 | N | A | -1.7105 | |
| 356 | Y | A | -0.1029 | |
| 357 | L | A | 0.6343 | |
| 358 | R | A | 0.9567 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.3648 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0953 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -2.0642 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6935 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2734 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3083 | |
| 376 | L | A | -1.7065 | |
| 377 | D | A | -1.9796 | |
| 378 | P | A | -1.0328 | |
| 379 | G | A | -1.0094 | |
| 380 | V | A | -0.9309 | |
| 381 | L | A | -0.5302 | |
| 382 | A | A | -0.6540 | |
| 383 | H | A | -0.8100 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4074 | |
| 386 | T | A | -0.5509 | |
| 387 | M | A | -0.2982 | |
| 388 | N | A | -0.8607 | |
| 389 | P | A | -1.2351 | |
| 390 | T | A | -1.4130 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.4010 | |
| 393 | E | A | -2.7161 | |
| 394 | N | A | -2.1186 | |
| 395 | W | A | -1.3102 | |
| 396 | N | A | -1.0310 | |
| 397 | L | A | -0.1849 | |
| 398 | G | A | 0.5327 | |
| 399 | F | A | 2.4264 | |
| 400 | V | A | 1.8486 | |
| 401 | P | A | 0.0525 | |
| 402 | P | A | -1.7804 | |
| 403 | K | A | -3.2200 | |
| 404 | E | A | -3.7530 | |
| 405 | R | A | -3.8553 | |
| 406 | E | A | -3.7698 | |
| 407 | D | A | -2.8664 | |
| 408 | P | A | -1.7606 | |
| 409 | Y | A | -0.9913 | |
| 410 | K | A | -2.1169 | |
| 411 | G | A | -0.6417 | |
| 412 | L | A | 0.6722 | |
| 413 | I | A | 1.5894 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3853 | |
| 416 | E | A | -1.6724 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.9443 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -2.0365 | |
| 421 | E | A | -2.7688 | |
| 422 | R | A | -2.5394 | |
| 423 | F | A | -1.3032 | |
| 424 | S | A | -1.4634 | |
| 425 | Q | A | -1.7413 | |
| 426 | D | A | -2.9010 | |
| 427 | L | A | -1.9841 | |
| 428 | D | A | -2.7693 | |
| 429 | Q | A | -2.6143 | |
| 430 | F | A | -1.4140 | |
| 431 | A | A | -0.8841 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.5409 | |
| 435 | K | A | -0.6865 | |
| 436 | F | A | 0.1525 | |
| 437 | L | A | 1.0400 | |
| 438 | Y | A | 0.8378 | |
| 439 | Q | A | -0.2689 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine