| Chain sequence(s) |
A: MSHHHHHHSGKKQMQKLLEEKWPELREILKEMYKVDWYLYSDIDWKIFSGDFDFLERVREIAKRTKHEPVKSVLEKFVQFIDEVEAKVKNS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:03)
[INFO] Main: Simulation completed successfully. (00:03:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5165 | |
| 2 | S | A | -0.6487 | |
| 3 | H | A | -1.6723 | |
| 4 | H | A | -2.3684 | |
| 5 | H | A | -2.9200 | |
| 6 | H | A | -2.7935 | |
| 7 | H | A | -2.5944 | |
| 8 | H | A | -2.5242 | |
| 9 | S | A | -1.7790 | |
| 10 | G | A | -2.2197 | |
| 11 | K | A | -2.5123 | |
| 12 | K | A | -2.7620 | |
| 13 | Q | A | -2.7676 | |
| 14 | M | A | 0.0000 | |
| 15 | Q | A | -2.3444 | |
| 16 | K | A | -3.4423 | |
| 17 | L | A | -2.7208 | |
| 18 | L | A | 0.0000 | |
| 19 | E | A | -3.5669 | |
| 20 | E | A | -3.7020 | |
| 21 | K | A | -3.1282 | |
| 22 | W | A | -2.8198 | |
| 23 | P | A | -2.5235 | |
| 24 | E | A | -3.3340 | |
| 25 | L | A | 0.0000 | |
| 26 | R | A | -2.7619 | |
| 27 | E | A | -3.3198 | |
| 28 | I | A | 0.0000 | |
| 29 | L | A | 0.0000 | |
| 30 | K | A | -2.5026 | |
| 31 | E | A | -2.4061 | |
| 32 | M | A | 0.0000 | |
| 33 | Y | A | -0.8433 | |
| 34 | K | A | -1.6943 | |
| 35 | V | A | -0.6783 | |
| 36 | D | A | 0.1995 | |
| 37 | W | A | 0.9933 | |
| 38 | Y | A | 1.6743 | |
| 39 | L | A | 1.1889 | |
| 40 | Y | A | 0.0000 | |
| 41 | S | A | 0.0922 | |
| 42 | D | A | -0.2681 | |
| 43 | I | A | 0.0000 | |
| 44 | D | A | -0.1908 | |
| 45 | W | A | 0.6172 | |
| 46 | K | A | -0.2829 | |
| 47 | I | A | 0.0000 | |
| 48 | F | A | 0.3429 | |
| 49 | S | A | 0.2624 | |
| 50 | G | A | -0.6147 | |
| 51 | D | A | -1.0996 | |
| 52 | F | A | -1.6128 | |
| 53 | D | A | -2.9739 | |
| 54 | F | A | 0.0000 | |
| 55 | L | A | 0.0000 | |
| 56 | E | A | -3.5739 | |
| 57 | R | A | -3.4033 | |
| 58 | V | A | 0.0000 | |
| 59 | R | A | -3.0952 | |
| 60 | E | A | -3.2562 | |
| 61 | I | A | -2.5433 | |
| 62 | A | A | 0.0000 | |
| 63 | K | A | -3.5361 | |
| 64 | R | A | -3.5004 | |
| 65 | T | A | -3.1678 | |
| 66 | K | A | -3.3539 | |
| 67 | H | A | -2.9001 | |
| 68 | E | A | -2.5372 | |
| 69 | P | A | -1.8469 | |
| 70 | V | A | -1.6596 | |
| 71 | K | A | -2.8604 | |
| 72 | S | A | -2.0586 | |
| 73 | V | A | 0.0000 | |
| 74 | L | A | 0.0000 | |
| 75 | E | A | -2.8265 | |
| 76 | K | A | -2.6339 | |
| 77 | F | A | 0.0000 | |
| 78 | V | A | -2.4943 | |
| 79 | Q | A | -2.8978 | |
| 80 | F | A | 0.0000 | |
| 81 | I | A | 0.0000 | |
| 82 | D | A | -2.7935 | |
| 83 | E | A | -3.0348 | |
| 84 | V | A | 0.0000 | |
| 85 | E | A | -2.7226 | |
| 86 | A | A | -2.5730 | |
| 87 | K | A | -2.7274 | |
| 88 | V | A | -2.6701 | |
| 89 | K | A | -2.8089 | |
| 90 | N | A | -2.5435 | |
| 91 | S | A | -1.5784 |