Project name: design5

Status: done

Started: 2026-05-21 07:39:44
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Chain sequence(s) A: SSRRTNQALQDAALRAGDCYEANLARLAARAEAAGDTELAAKLREALDLAQKGKEARLAGDYDRAIELVDKSQEILLEVYRLANRPEEILAAAQAVIDARKNGGALEYHRALVEFVSQLNTDWPPELRARTVEALQEQIAVL
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:13)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:14)
Show buried residues

Minimal score value
-3.849
Maximal score value
1.5946
Average score
-1.3773
Total score value
-195.5756

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S A -1.0658
2 S A -1.6222
3 R A -2.3290
4 R A -2.7222
5 T A -1.7251
6 N A -1.8366
7 Q A -1.9980
8 A A -0.9666
9 L A -0.8590
10 Q A -1.3720
11 D A -1.5220
12 A A 0.0000
13 A A -1.5488
14 L A -1.7094
15 R A -3.3862
16 A A -2.7156
17 G A -1.9811
18 D A -2.9724
19 C A 0.0000
20 Y A -1.0214
21 E A -1.6035
22 A A -1.0174
23 N A 0.0000
24 L A 0.0000
25 A A -1.2549
26 R A -2.1319
27 L A 0.0000
28 A A 0.0000
29 A A -2.1031
30 R A -2.7922
31 A A 0.0000
32 E A -3.1800
33 A A -1.7100
34 A A -1.4570
35 G A -1.9509
36 D A -2.3788
37 T A -2.0012
38 E A -2.2542
39 L A -1.8898
40 A A 0.0000
41 A A -1.8765
42 K A -1.8862
43 L A 0.0000
44 R A -2.3358
45 E A -2.8598
46 A A 0.0000
47 L A -1.8611
48 D A -2.6868
49 L A -2.2476
50 A A -2.2353
51 Q A -2.7169
52 K A -2.6534
53 G A 0.0000
54 K A -2.7579
55 E A -2.6242
56 A A 0.0000
57 R A -1.5683
58 L A 0.2006
59 A A -0.3579
60 G A -1.0040
61 D A -2.1864
62 Y A -2.4491
63 D A -3.4501
64 R A -3.8490
65 A A 0.0000
66 I A -1.9700
67 E A -2.7870
68 L A 0.0000
69 V A -1.0881
70 D A -1.7138
71 K A -1.6821
72 S A 0.0000
73 Q A 0.0000
74 E A -1.5089
75 I A -1.4540
76 L A 0.0000
77 L A -1.1033
78 E A -1.5850
79 V A 0.0000
80 Y A 0.0000
81 R A -2.2134
82 L A -0.8127
83 A A -1.1993
84 N A -2.0570
85 R A -1.9608
86 P A -2.2530
87 E A -3.0427
88 E A -2.7268
89 I A 0.0000
90 L A -1.7222
91 A A -1.3401
92 A A -1.0893
93 A A 0.0000
94 Q A -0.9998
95 A A -1.1171
96 V A 0.0000
97 I A 0.0000
98 D A -2.7733
99 A A -2.3031
100 R A -2.5655
101 K A -3.3767
102 N A -3.0227
103 G A -2.1730
104 G A -1.4224
105 A A -0.2566
106 L A 0.5876
107 E A -1.3111
108 Y A -1.1273
109 H A -0.8288
110 R A -1.1964
111 A A -0.9821
112 L A -0.5442
113 V A -1.3064
114 E A -1.6786
115 F A 0.0000
116 V A 0.0000
117 S A -1.2382
118 Q A -1.7558
119 L A -1.0943
120 N A 0.0000
121 T A -0.4503
122 D A -0.5197
123 W A 0.0000
124 P A -1.1197
125 P A -1.7828
126 E A -2.6845
127 L A 0.0000
128 R A -2.4935
129 A A -2.3528
130 R A -3.7373
131 T A 0.0000
132 V A -2.1815
133 E A -3.4662
134 A A 0.0000
135 L A 0.0000
136 Q A -2.3526
137 E A -2.5774
138 Q A 0.0000
139 I A -0.1111
140 A A 0.1479
141 V A 0.7906
142 L A 1.5946
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Laboratory of Theory of Biopolymers 2018