| Chain sequence(s) |
A: HAYYALSYCALILLRILLSLLLLLLFPRSRALVSRALVNLLVATLVMPWVVYLEVTGGVWNFSRICCDVFVTLDVMMCTASIWGGLFSLPLAFAVSCPLLFGFNTTGDPTVCSISNPDFVIYSSVVSFYLPFLLRGPSLLEIVCWLPFFLTHVLNTHCQTCHVSPELYSATTWLGYV
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:05)
[INFO] Main: Simulation completed successfully. (00:01:06)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | H | A | 0.0608 | |
| 2 | A | A | 1.0578 | |
| 3 | Y | A | 1.8671 | |
| 4 | Y | A | 1.4257 | |
| 5 | A | A | 0.0000 | |
| 6 | L | A | 2.3054 | |
| 7 | S | A | 1.5555 | |
| 8 | Y | A | 0.0000 | |
| 9 | C | A | 1.7150 | |
| 10 | A | A | 1.5887 | |
| 11 | L | A | 0.0000 | |
| 12 | I | A | 2.2673 | |
| 13 | L | A | 2.9999 | |
| 14 | L | A | 3.2828 | |
| 15 | R | A | 0.0000 | |
| 16 | I | A | 3.0168 | |
| 17 | L | A | 3.6815 | |
| 18 | L | A | 3.7619 | |
| 19 | S | A | 0.0000 | |
| 20 | L | A | 3.5943 | |
| 21 | L | A | 3.5800 | |
| 22 | L | A | 3.0060 | |
| 23 | L | A | 2.4123 | |
| 24 | L | A | 3.1380 | |
| 25 | L | A | 2.7037 | |
| 26 | F | A | 1.5106 | |
| 27 | P | A | 0.0881 | |
| 28 | R | A | -1.7230 | |
| 29 | S | A | -1.3280 | |
| 30 | R | A | -2.1259 | |
| 31 | A | A | -0.7015 | |
| 32 | L | A | -0.1930 | |
| 33 | V | A | -0.0472 | |
| 34 | S | A | 0.0000 | |
| 35 | R | A | -0.5883 | |
| 36 | A | A | 0.0000 | |
| 37 | L | A | 0.6815 | |
| 38 | V | A | 0.0000 | |
| 39 | N | A | 0.5166 | |
| 40 | L | A | 1.0286 | |
| 41 | L | A | 0.6732 | |
| 42 | V | A | 0.0000 | |
| 43 | A | A | 0.0000 | |
| 44 | T | A | 0.7244 | |
| 45 | L | A | 0.8347 | |
| 46 | V | A | 0.0000 | |
| 47 | M | A | 0.0000 | |
| 48 | P | A | 0.3702 | |
| 49 | W | A | 0.6776 | |
| 50 | V | A | 0.0000 | |
| 51 | V | A | 1.0074 | |
| 52 | Y | A | 1.0503 | |
| 53 | L | A | 0.7835 | |
| 54 | E | A | 0.9201 | |
| 55 | V | A | 1.9571 | |
| 56 | T | A | 0.6689 | |
| 57 | G | A | 0.2283 | |
| 58 | G | A | 0.4606 | |
| 59 | V | A | 1.1379 | |
| 60 | W | A | 0.0000 | |
| 61 | N | A | -0.5088 | |
| 62 | F | A | 0.7882 | |
| 63 | S | A | 0.0959 | |
| 64 | R | A | -0.2688 | |
| 65 | I | A | 1.9205 | |
| 66 | C | A | 1.3916 | |
| 67 | C | A | 0.0000 | |
| 68 | D | A | 1.5887 | |
| 69 | V | A | 2.0896 | |
| 70 | F | A | 0.0000 | |
| 71 | V | A | 0.0000 | |
| 72 | T | A | 0.0000 | |
| 73 | L | A | 1.0407 | |
| 74 | D | A | 0.3504 | |
| 75 | V | A | 0.4109 | |
| 76 | M | A | 0.7261 | |
| 77 | M | A | 0.0000 | |
| 78 | C | A | 0.1289 | |
| 79 | T | A | 0.0000 | |
| 80 | A | A | 0.0000 | |
| 81 | S | A | -0.0255 | |
| 82 | I | A | 0.0000 | |
| 83 | W | A | 0.3032 | |
| 84 | G | A | 0.0000 | |
| 85 | G | A | 0.0000 | |
| 86 | L | A | 1.1658 | |
| 87 | F | A | 2.1838 | |
| 88 | S | A | 0.0000 | |
| 89 | L | A | 1.4887 | |
| 90 | P | A | 1.0826 | |
| 91 | L | A | 1.3986 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 1.4547 | |
| 94 | A | A | 0.8352 | |
| 95 | V | A | 0.0000 | |
| 96 | S | A | 0.0000 | |
| 97 | C | A | 1.5212 | |
| 98 | P | A | 1.4253 | |
| 99 | L | A | 0.0000 | |
| 100 | L | A | 2.4908 | |
| 101 | F | A | 2.5361 | |
| 102 | G | A | 1.8214 | |
| 103 | F | A | 2.1028 | |
| 104 | N | A | 0.0000 | |
| 105 | T | A | -0.2423 | |
| 106 | T | A | -0.3433 | |
| 107 | G | A | -0.9002 | |
| 108 | D | A | -1.0794 | |
| 109 | P | A | -0.8828 | |
| 110 | T | A | -0.1656 | |
| 111 | V | A | 0.4401 | |
| 112 | C | A | 0.0000 | |
| 113 | S | A | -0.0210 | |
| 114 | I | A | 0.3616 | |
| 115 | S | A | -0.3111 | |
| 116 | N | A | -0.5737 | |
| 117 | P | A | -1.0139 | |
| 118 | D | A | -1.3966 | |
| 119 | F | A | 0.0000 | |
| 120 | V | A | 0.0000 | |
| 121 | I | A | 0.7723 | |
| 122 | Y | A | 0.8995 | |
| 123 | S | A | 0.0000 | |
| 124 | S | A | 0.0000 | |
| 125 | V | A | 2.0249 | |
| 126 | V | A | 1.4387 | |
| 127 | S | A | 0.0000 | |
| 128 | F | A | 0.0000 | |
| 129 | Y | A | 1.7347 | |
| 130 | L | A | 1.9155 | |
| 131 | P | A | 0.0000 | |
| 132 | F | A | 0.0000 | |
| 133 | L | A | 2.1131 | |
| 134 | L | A | 1.6066 | |
| 135 | R | A | -0.5289 | |
| 136 | G | A | 0.0088 | |
| 137 | P | A | 0.7570 | |
| 138 | S | A | 1.0048 | |
| 139 | L | A | 2.7219 | |
| 140 | L | A | 2.9898 | |
| 141 | E | A | 1.8158 | |
| 142 | I | A | 2.3728 | |
| 143 | V | A | 2.3272 | |
| 144 | C | A | 0.0000 | |
| 145 | W | A | 1.7868 | |
| 146 | L | A | 1.7407 | |
| 147 | P | A | 1.2476 | |
| 148 | F | A | 1.2494 | |
| 149 | F | A | 0.0000 | |
| 150 | L | A | 1.3173 | |
| 151 | T | A | 0.0000 | |
| 152 | H | A | 0.3576 | |
| 153 | V | A | 0.3685 | |
| 154 | L | A | 0.0790 | |
| 155 | N | A | -0.9714 | |
| 156 | T | A | -0.8268 | |
| 157 | H | A | -0.8493 | |
| 158 | C | A | -0.7119 | |
| 159 | Q | A | -1.4708 | |
| 160 | T | A | -0.8675 | |
| 161 | C | A | -0.7139 | |
| 162 | H | A | -1.2893 | |
| 163 | V | A | 0.0000 | |
| 164 | S | A | -0.7224 | |
| 165 | P | A | -0.9614 | |
| 166 | E | A | -1.3427 | |
| 167 | L | A | 0.2587 | |
| 168 | Y | A | 0.2112 | |
| 169 | S | A | -0.1687 | |
| 170 | A | A | 0.2275 | |
| 171 | T | A | 0.0000 | |
| 172 | T | A | 0.6054 | |
| 173 | W | A | 1.1371 | |
| 174 | L | A | 1.4835 | |
| 175 | G | A | 0.0000 | |
| 176 | Y | A | 0.0000 | |
| 177 | V | A | 2.2903 |