| Chain sequence(s) |
A: LPAPKNLVVSRVTEDSARLSWDIDEQRDWFDSFLIQYQESEKVGEAIVLTVPGSERSYDLTGLKPGIEYTVSIYGVYHVYRSNPLSAIFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:03)
[INFO] Main: Simulation completed successfully. (00:01:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 0.4250 | |
| 2 | P | A | -0.9077 | |
| 3 | A | A | -1.2462 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -2.2425 | |
| 6 | N | A | -1.8706 | |
| 7 | L | A | -0.4915 | |
| 8 | V | A | 0.5815 | |
| 9 | V | A | 0.4138 | |
| 10 | S | A | -0.7387 | |
| 11 | R | A | -2.0019 | |
| 12 | V | A | -0.9963 | |
| 13 | T | A | -1.7664 | |
| 14 | E | A | -2.9740 | |
| 15 | D | A | -2.6483 | |
| 16 | S | A | -2.0517 | |
| 17 | A | A | 0.0000 | |
| 18 | R | A | -1.2796 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.6937 | |
| 21 | W | A | 0.0000 | |
| 22 | D | A | -2.2878 | |
| 23 | I | A | -2.9545 | |
| 24 | D | A | -3.8469 | |
| 25 | E | A | -4.2557 | |
| 26 | Q | A | -3.6642 | |
| 27 | R | A | -3.9830 | |
| 28 | D | A | -3.6960 | |
| 29 | W | A | -1.9233 | |
| 30 | F | A | 0.0000 | |
| 31 | D | A | -2.0105 | |
| 32 | S | A | -1.5137 | |
| 33 | F | A | 0.0000 | |
| 34 | L | A | 0.4452 | |
| 35 | I | A | 0.0000 | |
| 36 | Q | A | 0.8277 | |
| 37 | Y | A | 0.5056 | |
| 38 | Q | A | -0.6750 | |
| 39 | E | A | -1.6680 | |
| 40 | S | A | -1.4586 | |
| 41 | E | A | -2.3281 | |
| 42 | K | A | -1.8787 | |
| 43 | V | A | 0.0295 | |
| 44 | G | A | -0.9186 | |
| 45 | E | A | -1.5083 | |
| 46 | A | A | -0.1820 | |
| 47 | I | A | 1.0788 | |
| 48 | V | A | 2.0208 | |
| 49 | L | A | 1.3598 | |
| 50 | T | A | 0.4891 | |
| 51 | V | A | 0.0000 | |
| 52 | P | A | -1.1318 | |
| 53 | G | A | 0.0000 | |
| 54 | S | A | -1.6076 | |
| 55 | E | A | -1.7127 | |
| 56 | R | A | -1.1800 | |
| 57 | S | A | -0.8437 | |
| 58 | Y | A | -0.7103 | |
| 59 | D | A | -1.6511 | |
| 60 | L | A | 0.0000 | |
| 61 | T | A | -1.4296 | |
| 62 | G | A | -1.4837 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.9063 | |
| 65 | P | A | -2.4194 | |
| 66 | G | A | -1.6944 | |
| 67 | I | A | -1.9301 | |
| 68 | E | A | -1.8133 | |
| 69 | Y | A | 0.0000 | |
| 70 | T | A | 0.0403 | |
| 71 | V | A | 0.0000 | |
| 72 | S | A | 0.0000 | |
| 73 | I | A | 0.0000 | |
| 74 | Y | A | 0.0000 | |
| 75 | G | A | 0.0000 | |
| 76 | V | A | -0.2744 | |
| 77 | Y | A | -0.2221 | |
| 78 | H | A | -0.2066 | |
| 79 | V | A | 1.4464 | |
| 80 | Y | A | 1.2774 | |
| 81 | R | A | -0.9218 | |
| 82 | S | A | 0.0000 | |
| 83 | N | A | -1.5534 | |
| 84 | P | A | -1.0491 | |
| 85 | L | A | -0.6001 | |
| 86 | S | A | 0.0679 | |
| 87 | A | A | 1.1052 | |
| 88 | I | A | 1.7548 | |
| 89 | F | A | 0.0000 | |
| 90 | T | A | -0.7267 | |
| 91 | T | A | -1.8180 |