| Chain sequence(s) |
A: FTVTVPKDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQDAGVYRCMISYGGADYKRITHHHH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:00)
[INFO] Main: Simulation completed successfully. (00:00:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 0.7227 | |
| 2 | T | A | 0.1856 | |
| 3 | V | A | 0.0000 | |
| 4 | T | A | -1.0264 | |
| 5 | V | A | -1.2625 | |
| 6 | P | A | -1.2906 | |
| 7 | K | A | -2.3119 | |
| 8 | D | A | -2.2722 | |
| 9 | L | A | 0.2023 | |
| 10 | Y | A | 0.7229 | |
| 11 | V | A | 1.5042 | |
| 12 | V | A | -0.0542 | |
| 13 | E | A | -1.6206 | |
| 14 | Y | A | -0.4261 | |
| 15 | G | A | -1.2965 | |
| 16 | S | A | -1.6339 | |
| 17 | N | A | -2.0561 | |
| 18 | M | A | 0.0000 | |
| 19 | T | A | -0.5079 | |
| 20 | I | A | 0.0000 | |
| 21 | E | A | -1.0953 | |
| 22 | C | A | 0.0000 | |
| 23 | K | A | -0.9856 | |
| 24 | F | A | 0.0000 | |
| 25 | P | A | -0.4974 | |
| 26 | V | A | -1.2472 | |
| 27 | E | A | -2.7157 | |
| 28 | K | A | -3.2155 | |
| 29 | Q | A | -2.3995 | |
| 30 | L | A | -1.2922 | |
| 31 | D | A | -1.6204 | |
| 32 | L | A | -0.5567 | |
| 33 | A | A | -0.5381 | |
| 34 | A | A | -0.2120 | |
| 35 | L | A | 0.0000 | |
| 36 | I | A | 0.4876 | |
| 37 | V | A | 0.0000 | |
| 38 | Y | A | 0.2509 | |
| 39 | W | A | 0.0000 | |
| 40 | E | A | -1.9759 | |
| 41 | M | A | 0.0000 | |
| 42 | E | A | -2.8777 | |
| 43 | D | A | -3.1049 | |
| 44 | K | A | -2.2123 | |
| 45 | N | A | -1.3189 | |
| 46 | I | A | 0.0000 | |
| 47 | I | A | 0.0000 | |
| 48 | Q | A | -0.5986 | |
| 49 | F | A | 0.0000 | |
| 50 | V | A | -0.5757 | |
| 51 | H | A | -1.3981 | |
| 52 | G | A | -1.5243 | |
| 53 | E | A | -2.2827 | |
| 54 | E | A | -1.6647 | |
| 55 | D | A | -1.2173 | |
| 56 | L | A | -0.3987 | |
| 57 | K | A | -1.1995 | |
| 58 | V | A | -0.0612 | |
| 59 | Q | A | -1.0431 | |
| 60 | H | A | -1.3228 | |
| 61 | S | A | -1.3779 | |
| 62 | S | A | -1.3656 | |
| 63 | Y | A | 0.0000 | |
| 64 | R | A | -2.6522 | |
| 65 | Q | A | -2.2120 | |
| 66 | R | A | 0.0000 | |
| 67 | A | A | 0.0000 | |
| 68 | R | A | -1.1092 | |
| 69 | L | A | 0.0000 | |
| 70 | L | A | -1.3668 | |
| 71 | K | A | -2.5727 | |
| 72 | D | A | -2.4277 | |
| 73 | Q | A | -1.3584 | |
| 74 | L | A | 0.0000 | |
| 75 | S | A | -0.7260 | |
| 76 | L | A | 0.6126 | |
| 77 | G | A | 0.0000 | |
| 78 | N | A | -0.6726 | |
| 79 | A | A | 0.0000 | |
| 80 | A | A | 0.0000 | |
| 81 | L | A | 0.0000 | |
| 82 | Q | A | -0.6878 | |
| 83 | I | A | 0.0000 | |
| 84 | T | A | -1.7698 | |
| 85 | D | A | -2.3084 | |
| 86 | V | A | 0.0000 | |
| 87 | K | A | -1.0232 | |
| 88 | L | A | 0.3120 | |
| 89 | Q | A | -0.6739 | |
| 90 | D | A | 0.0000 | |
| 91 | A | A | -0.0156 | |
| 92 | G | A | -0.1010 | |
| 93 | V | A | -0.1061 | |
| 94 | Y | A | 0.0000 | |
| 95 | R | A | -1.5031 | |
| 96 | C | A | 0.0000 | |
| 97 | M | A | 0.1662 | |
| 98 | I | A | 0.0000 | |
| 99 | S | A | 0.4603 | |
| 100 | Y | A | 0.1490 | |
| 101 | G | A | -0.1982 | |
| 102 | G | A | -0.0638 | |
| 103 | A | A | 0.3059 | |
| 104 | D | A | 0.2618 | |
| 105 | Y | A | 0.0685 | |
| 106 | K | A | -1.5288 | |
| 107 | R | A | -2.2937 | |
| 108 | I | A | 0.0000 | |
| 109 | T | A | -0.2122 | |
| 110 | H | A | 0.0000 | |
| 111 | H | A | 0.1115 | |
| 112 | H | A | 0.0000 | |
| 113 | H | A | -0.9028 |