| Chain sequence(s) |
L: VAQGGAAGLA
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:02)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 280 | V | L | 1.7460 | |
| 281 | A | L | 0.1631 | |
| 282 | Q | L | -1.2763 | |
| 283 | G | L | -0.7768 | |
| 284 | G | L | -0.5389 | |
| 285 | A | L | -0.0144 | |
| 286 | A | L | 0.0222 | |
| 287 | G | L | 0.2775 | |
| 288 | L | L | 1.5120 | |
| 289 | A | L | 0.3363 |