| Chain sequence(s) |
A: DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSSPFTFGQGTKVEIK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:11)
[INFO] Main: Simulation completed successfully. (00:01:12)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -2.0081 | |
| 2 | I | A | -1.0964 | |
| 3 | Q | A | -1.7948 | |
| 4 | M | A | 0.0000 | |
| 5 | T | A | -1.2933 | |
| 6 | Q | A | 0.0000 | |
| 7 | S | A | -0.8807 | |
| 8 | P | A | -0.5934 | |
| 9 | S | A | -0.7666 | |
| 10 | S | A | -0.7800 | |
| 11 | L | A | -0.6834 | |
| 12 | S | A | -1.0939 | |
| 13 | A | A | -1.0681 | |
| 14 | S | A | -0.8807 | |
| 15 | V | A | -0.1754 | |
| 16 | G | A | -0.7947 | |
| 17 | D | A | -1.7901 | |
| 18 | R | A | -2.4189 | |
| 19 | V | A | 0.0000 | |
| 20 | T | A | -0.6665 | |
| 21 | I | A | 0.0000 | |
| 22 | T | A | -0.8129 | |
| 23 | C | A | 0.0000 | |
| 24 | R | A | -2.7345 | |
| 25 | A | A | 0.0000 | |
| 26 | S | A | -1.9075 | |
| 27 | Q | A | -1.9783 | |
| 28 | S | A | -0.9594 | |
| 29 | I | A | 0.0000 | |
| 30 | S | A | -0.0821 | |
| 31 | S | A | 0.3497 | |
| 32 | Y | A | 1.4090 | |
| 33 | L | A | 0.0000 | |
| 34 | N | A | 0.6700 | |
| 35 | W | A | 0.0000 | |
| 36 | Y | A | -0.0131 | |
| 37 | Q | A | 0.0000 | |
| 38 | Q | A | -1.4722 | |
| 39 | K | A | -1.8895 | |
| 40 | P | A | -1.3125 | |
| 41 | G | A | -1.6447 | |
| 42 | K | A | -2.4889 | |
| 43 | A | A | -1.4865 | |
| 44 | P | A | -1.4165 | |
| 45 | K | A | -1.5997 | |
| 46 | L | A | -0.2113 | |
| 47 | L | A | 0.0000 | |
| 48 | I | A | 0.0000 | |
| 49 | Y | A | 0.9949 | |
| 50 | A | A | 0.6390 | |
| 51 | A | A | 0.0000 | |
| 52 | S | A | -0.0103 | |
| 53 | S | A | 0.2050 | |
| 54 | L | A | 0.3332 | |
| 55 | Q | A | -0.3243 | |
| 56 | S | A | -0.4818 | |
| 57 | G | A | -0.6437 | |
| 58 | V | A | 0.0000 | |
| 59 | P | A | -0.4456 | |
| 60 | S | A | -0.4596 | |
| 61 | R | A | -0.7879 | |
| 62 | F | A | 0.0000 | |
| 63 | S | A | -0.2792 | |
| 64 | G | A | -0.1499 | |
| 65 | S | A | -0.5922 | |
| 66 | G | A | -0.8775 | |
| 67 | S | A | -0.7920 | |
| 68 | G | A | -0.9628 | |
| 69 | T | A | -1.6552 | |
| 70 | D | A | -2.0025 | |
| 71 | F | A | 0.0000 | |
| 72 | T | A | -0.7209 | |
| 73 | L | A | 0.0000 | |
| 74 | T | A | -0.5982 | |
| 75 | I | A | 0.0000 | |
| 76 | S | A | -1.3489 | |
| 77 | S | A | -1.1641 | |
| 78 | L | A | 0.0000 | |
| 79 | Q | A | -0.9602 | |
| 80 | P | A | -1.1308 | |
| 81 | E | A | -1.7344 | |
| 82 | D | A | 0.0000 | |
| 83 | F | A | -0.7026 | |
| 84 | A | A | 0.0000 | |
| 85 | T | A | -0.6969 | |
| 86 | Y | A | 0.0000 | |
| 87 | Y | A | 0.0919 | |
| 88 | C | A | 0.0000 | |
| 89 | Q | A | 1.0590 | |
| 90 | Q | A | 0.0000 | |
| 91 | S | A | 1.5191 | |
| 92 | Y | A | 1.4161 | |
| 93 | S | A | 0.5267 | |
| 94 | S | A | 0.1880 | |
| 95 | P | A | 0.4768 | |
| 96 | F | A | 1.7954 | |
| 97 | T | A | 0.8892 | |
| 98 | F | A | 1.2830 | |
| 99 | G | A | 0.0000 | |
| 100 | Q | A | -1.0857 | |
| 101 | G | A | 0.0000 | |
| 102 | T | A | 0.0000 | |
| 103 | K | A | -1.0955 | |
| 104 | V | A | 0.0000 | |
| 105 | E | A | -1.3400 | |
| 106 | I | A | -0.9624 | |
| 107 | K | A | -1.6050 |