Project name: CUR-TS-PCa001_VL_B7H3_IgC_novel

Status: done

Started: 2026-04-07 22:15:26
Settings
Chain sequence(s) A: DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSSPFTFGQGTKVEIK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:11)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:12)
Show buried residues

Minimal score value
-2.7345
Maximal score value
1.7954
Average score
-0.4912
Total score value
-52.5587

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -2.0081
2 I A -1.0964
3 Q A -1.7948
4 M A 0.0000
5 T A -1.2933
6 Q A 0.0000
7 S A -0.8807
8 P A -0.5934
9 S A -0.7666
10 S A -0.7800
11 L A -0.6834
12 S A -1.0939
13 A A -1.0681
14 S A -0.8807
15 V A -0.1754
16 G A -0.7947
17 D A -1.7901
18 R A -2.4189
19 V A 0.0000
20 T A -0.6665
21 I A 0.0000
22 T A -0.8129
23 C A 0.0000
24 R A -2.7345
25 A A 0.0000
26 S A -1.9075
27 Q A -1.9783
28 S A -0.9594
29 I A 0.0000
30 S A -0.0821
31 S A 0.3497
32 Y A 1.4090
33 L A 0.0000
34 N A 0.6700
35 W A 0.0000
36 Y A -0.0131
37 Q A 0.0000
38 Q A -1.4722
39 K A -1.8895
40 P A -1.3125
41 G A -1.6447
42 K A -2.4889
43 A A -1.4865
44 P A -1.4165
45 K A -1.5997
46 L A -0.2113
47 L A 0.0000
48 I A 0.0000
49 Y A 0.9949
50 A A 0.6390
51 A A 0.0000
52 S A -0.0103
53 S A 0.2050
54 L A 0.3332
55 Q A -0.3243
56 S A -0.4818
57 G A -0.6437
58 V A 0.0000
59 P A -0.4456
60 S A -0.4596
61 R A -0.7879
62 F A 0.0000
63 S A -0.2792
64 G A -0.1499
65 S A -0.5922
66 G A -0.8775
67 S A -0.7920
68 G A -0.9628
69 T A -1.6552
70 D A -2.0025
71 F A 0.0000
72 T A -0.7209
73 L A 0.0000
74 T A -0.5982
75 I A 0.0000
76 S A -1.3489
77 S A -1.1641
78 L A 0.0000
79 Q A -0.9602
80 P A -1.1308
81 E A -1.7344
82 D A 0.0000
83 F A -0.7026
84 A A 0.0000
85 T A -0.6969
86 Y A 0.0000
87 Y A 0.0919
88 C A 0.0000
89 Q A 1.0590
90 Q A 0.0000
91 S A 1.5191
92 Y A 1.4161
93 S A 0.5267
94 S A 0.1880
95 P A 0.4768
96 F A 1.7954
97 T A 0.8892
98 F A 1.2830
99 G A 0.0000
100 Q A -1.0857
101 G A 0.0000
102 T A 0.0000
103 K A -1.0955
104 V A 0.0000
105 E A -1.3400
106 I A -0.9624
107 K A -1.6050
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Laboratory of Theory of Biopolymers 2018