| Chain sequence(s) |
A: MGEVQLVESGGGSVQAGGSLRLSSAASGIPIQDSVVLWFRQAPGKEREGVLAAKYRSPTYYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTAIYYSAAIRAVIGRHIRPHIYWGQGTQVTVGGGS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:55)
[INFO] Main: Simulation completed successfully. (00:01:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.4556 | |
| 2 | G | A | -0.9539 | |
| 3 | E | A | -1.9348 | |
| 4 | V | A | -0.8604 | |
| 5 | Q | A | -1.0265 | |
| 6 | L | A | 0.0000 | |
| 7 | V | A | 0.9406 | |
| 8 | E | A | 0.0000 | |
| 9 | S | A | -0.6150 | |
| 10 | G | A | -1.2218 | |
| 11 | G | A | -1.1569 | |
| 12 | G | A | -0.9200 | |
| 13 | S | A | -0.6974 | |
| 14 | V | A | -0.8982 | |
| 15 | Q | A | -1.9301 | |
| 16 | A | A | -2.1013 | |
| 17 | G | A | -1.5864 | |
| 18 | G | A | -1.1923 | |
| 19 | S | A | -1.2657 | |
| 20 | L | A | -1.1241 | |
| 21 | R | A | -2.0476 | |
| 22 | L | A | 0.0000 | |
| 23 | S | A | -0.4299 | |
| 24 | S | A | 0.0000 | |
| 25 | A | A | -0.2160 | |
| 26 | A | A | -0.2603 | |
| 27 | S | A | -0.5710 | |
| 28 | G | A | -0.7487 | |
| 29 | I | A | 0.0000 | |
| 30 | P | A | -1.0868 | |
| 31 | I | A | 0.0000 | |
| 32 | Q | A | -1.9334 | |
| 33 | D | A | -1.0129 | |
| 34 | S | A | 0.0000 | |
| 35 | V | A | -0.4369 | |
| 36 | V | A | 0.0000 | |
| 37 | L | A | 0.5958 | |
| 38 | W | A | 0.0000 | |
| 39 | F | A | -0.4816 | |
| 40 | R | A | -1.3645 | |
| 41 | Q | A | -2.1545 | |
| 42 | A | A | -2.0477 | |
| 43 | P | A | -1.4378 | |
| 44 | G | A | -1.9814 | |
| 45 | K | A | -3.4228 | |
| 46 | E | A | -3.7318 | |
| 47 | R | A | -3.1331 | |
| 48 | E | A | -2.1789 | |
| 49 | G | A | -0.7560 | |
| 50 | V | A | 0.0000 | |
| 51 | L | A | 0.0000 | |
| 52 | A | A | 0.0000 | |
| 53 | A | A | 0.0000 | |
| 54 | K | A | -1.1590 | |
| 55 | Y | A | -1.2196 | |
| 56 | R | A | -2.1859 | |
| 57 | S | A | -1.1983 | |
| 58 | P | A | -0.5386 | |
| 59 | T | A | 0.1157 | |
| 60 | Y | A | 0.7865 | |
| 61 | Y | A | -0.2372 | |
| 62 | A | A | 0.0000 | |
| 63 | D | A | -2.2799 | |
| 64 | S | A | -1.7843 | |
| 65 | V | A | 0.0000 | |
| 66 | K | A | -2.4220 | |
| 67 | G | A | -1.7911 | |
| 68 | R | A | -1.5737 | |
| 69 | F | A | 0.0000 | |
| 70 | T | A | -0.7336 | |
| 71 | I | A | -0.1051 | |
| 72 | S | A | -0.7363 | |
| 73 | Q | A | -1.8757 | |
| 74 | D | A | -2.3252 | |
| 75 | N | A | -2.7267 | |
| 76 | A | A | -1.8886 | |
| 77 | K | A | -2.5216 | |
| 78 | N | A | -2.0918 | |
| 79 | T | A | 0.0000 | |
| 80 | V | A | 0.0000 | |
| 81 | Y | A | -0.7526 | |
| 82 | L | A | 0.0000 | |
| 83 | Q | A | -1.1751 | |
| 84 | M | A | 0.0000 | |
| 85 | N | A | -1.5638 | |
| 86 | S | A | -1.3856 | |
| 87 | L | A | 0.0000 | |
| 88 | K | A | -2.8766 | |
| 89 | P | A | -2.2567 | |
| 90 | E | A | -2.5148 | |
| 91 | D | A | 0.0000 | |
| 92 | T | A | -1.2298 | |
| 93 | A | A | 0.0000 | |
| 94 | I | A | -0.5243 | |
| 95 | Y | A | 0.0000 | |
| 96 | Y | A | 0.0000 | |
| 97 | S | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | I | A | 0.0114 | |
| 101 | R | A | -0.2378 | |
| 102 | A | A | 0.4257 | |
| 103 | V | A | 0.9866 | |
| 104 | I | A | 1.4952 | |
| 105 | G | A | -0.0697 | |
| 106 | R | A | -1.5109 | |
| 107 | H | A | -1.1098 | |
| 108 | I | A | -0.0704 | |
| 109 | R | A | -1.5433 | |
| 110 | P | A | -0.7765 | |
| 111 | H | A | -0.6800 | |
| 112 | I | A | 0.5339 | |
| 113 | Y | A | 0.7054 | |
| 114 | W | A | 0.8531 | |
| 115 | G | A | 0.1772 | |
| 116 | Q | A | -0.7818 | |
| 117 | G | A | 0.0000 | |
| 118 | T | A | 0.0000 | |
| 119 | Q | A | -1.2950 | |
| 120 | V | A | 0.0000 | |
| 121 | T | A | -1.0820 | |
| 122 | V | A | 0.0000 | |
| 123 | G | A | -1.6020 | |
| 124 | G | A | -1.6948 | |
| 125 | G | A | -1.4463 | |
| 126 | S | A | -0.7271 |