| Chain sequence(s) |
A: TEVKVIIQPEKSVVSVAAGDSTVLNCTLTSLLPVGPIRWYRGVSRQLIIYSFTTEHFPRVTNVATKRSNLDFSIRRISNNVTPEDAGTYYCVKFQQRGSPDTEEIQSGGGTEVYYVLA
B: YRYSAVYSSIHPSWCG input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:48)
[INFO] Main: Simulation completed successfully. (00:00:48)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 6 | T | A | -1.2048 | |
| 7 | E | A | -2.0533 | |
| 8 | V | A | 0.0000 | |
| 9 | K | A | -1.9516 | |
| 10 | V | A | -0.6857 | |
| 11 | I | A | -0.1728 | |
| 12 | Q | A | -0.8651 | |
| 13 | P | A | -1.1007 | |
| 14 | E | A | -1.9967 | |
| 15 | K | A | -2.4776 | |
| 16 | S | A | -1.3239 | |
| 17 | V | A | -0.2700 | |
| 18 | S | A | 0.4311 | |
| 19 | V | A | 0.0000 | |
| 20 | A | A | -0.2387 | |
| 21 | A | A | -0.8138 | |
| 22 | G | A | -1.7672 | |
| 23 | D | A | -2.3544 | |
| 24 | S | A | -1.5263 | |
| 25 | T | A | 0.0000 | |
| 26 | V | A | 0.3830 | |
| 27 | L | A | 0.0000 | |
| 28 | N | A | -0.4702 | |
| 29 | C | A | 0.0000 | |
| 30 | T | A | 0.0000 | |
| 31 | L | A | 0.0000 | |
| 32 | T | A | -0.8681 | |
| 33 | S | A | -0.1926 | |
| 34 | L | A | 1.1380 | |
| 35 | L | A | 1.9150 | |
| 36 | P | A | 1.1794 | |
| 37 | V | A | 1.3767 | |
| 38 | G | A | 0.0000 | |
| 39 | P | A | -0.5567 | |
| 40 | I | A | 0.0000 | |
| 41 | R | A | -0.2418 | |
| 42 | W | A | 0.0000 | |
| 43 | Y | A | 0.0000 | |
| 44 | R | A | -0.5483 | |
| 45 | G | A | -0.0707 | |
| 46 | V | A | 1.0823 | |
| 49 | S | A | -0.2896 | |
| 50 | R | A | -0.6672 | |
| 51 | Q | A | -1.0956 | |
| 52 | L | A | -0.2117 | |
| 53 | I | A | 0.0000 | |
| 54 | Y | A | 0.0000 | |
| 55 | S | A | 0.0000 | |
| 56 | F | A | 0.0000 | |
| 57 | T | A | -0.6747 | |
| 58 | T | A | -0.4133 | |
| 59 | E | A | -1.9122 | |
| 60 | H | A | -1.9885 | |
| 61 | F | A | -0.5704 | |
| 62 | P | A | -0.7520 | |
| 63 | R | A | -0.9551 | |
| 64 | V | A | 1.1038 | |
| 65 | T | A | 0.5522 | |
| 66 | N | A | 0.5243 | |
| 67 | V | A | 1.6435 | |
| 70 | A | A | -0.8056 | |
| 71 | T | A | -1.5809 | |
| 72 | K | A | -2.7196 | |
| 73 | R | A | -2.7989 | |
| 74 | S | A | -1.4352 | |
| 75 | N | A | -1.4739 | |
| 76 | L | A | -0.9753 | |
| 77 | D | A | -0.7153 | |
| 78 | F | A | 0.0000 | |
| 79 | S | A | 0.0000 | |
| 80 | I | A | 0.0000 | |
| 81 | R | A | -0.3639 | |
| 82 | I | A | 0.0000 | |
| 83 | S | A | -1.1907 | |
| 84 | N | A | -2.2556 | |
| 85 | V | A | 0.0000 | |
| 86 | T | A | -1.1970 | |
| 87 | P | A | -0.7830 | |
| 88 | E | A | -1.9140 | |
| 89 | D | A | 0.0000 | |
| 90 | A | A | -0.3863 | |
| 91 | G | A | -0.5728 | |
| 92 | T | A | -0.4536 | |
| 93 | Y | A | 0.0000 | |
| 94 | Y | A | 0.0882 | |
| 95 | C | A | 0.0000 | |
| 96 | V | A | 0.0000 | |
| 97 | K | A | 0.0000 | |
| 98 | F | A | 0.0000 | |
| 99 | Q | A | -1.1480 | |
| 100 | R | A | -2.0912 | |
| 101 | G | A | -1.3181 | |
| 102 | S | A | -0.9643 | |
| 103 | P | A | -1.2111 | |
| 104 | D | A | -1.7051 | |
| 105 | T | A | -1.4565 | |
| 106 | E | A | -1.7420 | |
| 107 | I | A | -0.7400 | |
| 108 | Q | A | -1.2649 | |
| 109 | S | A | -0.7249 | |
| 110 | G | A | 0.0000 | |
| 111 | G | A | -0.9275 | |
| 112 | G | A | 0.0000 | |
| 113 | T | A | 0.0000 | |
| 114 | E | A | -1.1484 | |
| 115 | V | A | 0.0000 | |
| 116 | Y | A | 1.0086 | |
| 117 | V | A | 0.5638 | |
| 118 | L | A | 1.1555 | |
| 119 | A | A | 0.6554 | |
| 102 | Y | B | 1.3288 | |
| 103 | R | B | 0.0335 | |
| 104 | Y | B | 0.3727 | |
| 105 | S | B | 0.4633 | |
| 106 | A | B | 0.4778 | |
| 107 | V | B | 0.6061 | |
| 108 | Y | B | 0.4813 | |
| 109 | S | B | 0.1504 | |
| 110 | I | B | 0.0000 | |
| 111 | H | B | 0.0000 | |
| 112 | P | B | -0.3357 | |
| 113 | S | B | 0.0922 | |
| 114 | W | B | 1.1632 | |
| 115 | C | B | 0.9858 | |
| 116 | G | B | 0.2096 |