| Chain sequence(s) |
A: GPSFCKADEKPCEYHADCCNCCLSGICAPSTNWILPGCSTSSFFKI
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:17)
[INFO] Main: Simulation completed successfully. (00:00:17)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.4322 | |
| 2 | P | A | -0.0942 | |
| 3 | S | A | 0.4934 | |
| 4 | F | A | 1.6410 | |
| 5 | C | A | 0.6701 | |
| 6 | K | A | -1.0900 | |
| 7 | A | A | -1.6580 | |
| 8 | D | A | -2.5944 | |
| 9 | E | A | -2.8180 | |
| 10 | K | A | -2.3753 | |
| 11 | P | A | -1.1642 | |
| 12 | C | A | -0.8295 | |
| 13 | E | A | -1.1353 | |
| 14 | Y | A | 0.2664 | |
| 15 | H | A | -0.0460 | |
| 16 | A | A | 0.2218 | |
| 17 | D | A | -0.0036 | |
| 18 | C | A | 0.0000 | |
| 19 | C | A | 0.3314 | |
| 20 | N | A | -0.7746 | |
| 21 | C | A | 0.0000 | |
| 22 | C | A | 0.0000 | |
| 23 | L | A | -0.1088 | |
| 24 | S | A | -0.2126 | |
| 25 | G | A | -0.6304 | |
| 26 | I | A | -0.8834 | |
| 27 | C | A | 0.0000 | |
| 28 | A | A | -1.0703 | |
| 29 | P | A | -0.9352 | |
| 30 | S | A | -0.1894 | |
| 31 | T | A | 0.0000 | |
| 32 | N | A | -0.2288 | |
| 33 | W | A | 1.6469 | |
| 34 | I | A | 2.5743 | |
| 35 | L | A | 1.6914 | |
| 36 | P | A | 0.4591 | |
| 37 | G | A | 0.1134 | |
| 38 | C | A | -0.1312 | |
| 39 | S | A | -0.3516 | |
| 40 | T | A | -0.0057 | |
| 41 | S | A | 0.4532 | |
| 42 | S | A | 0.7704 | |
| 43 | F | A | 2.4202 | |
| 44 | F | A | 2.4046 | |
| 45 | K | A | 0.7661 | |
| 46 | I | A | 1.8485 |