Project name: query_structure

Status: done

Started: 2026-03-16 23:11:30
Settings
Chain sequence(s) A: CGETCLLGTCYTTGCTCNKYRVCTKDGSVLN
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:02)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:16)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:17)
Show buried residues

Minimal score value
-2.5782
Maximal score value
2.0518
Average score
-0.3019
Total score value
-9.3588

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 C A -0.8006
2 G A -0.1314
3 E A -0.3398
4 T A 0.1635
5 C A 0.0000
6 L A 1.7534
7 L A 2.0518
8 G A 0.7221
9 T A 0.5661
10 C A 0.7521
11 Y A 1.3165
12 T A 0.2484
13 T A -0.1488
14 G A -0.9800
15 C A -1.1248
16 T A -0.9792
17 C A -0.6820
18 N A -1.2920
19 K A -1.7215
20 Y A -0.3762
21 R A -1.3953
22 V A -0.4662
23 C A 0.0000
24 T A -1.3579
25 K A -2.4127
26 D A -2.5782
27 G A -1.4489
28 S A -0.2033
29 V A 1.2308
30 L A 1.1516
31 N A -0.8763
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Laboratory of Theory of Biopolymers 2018